RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 EPHA7Q15375 998 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 PCNX4Q63HM2 1172 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 GPC2Q8N158 579 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 AS3MTQ9HBK9 375 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 UBIAD1Q9Y5Z9 338 aa18.46■□□□□ 0.55
SH3D21-203ENST00000480549 MARSP56192 900 aaKnown RBP18.45■□□□□ 0.54
SH3D21-203ENST00000480549 ZBED6P86452 979 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 C1orf186Q6ZWK4 172 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 IRX2Q9BZI1 471 aaPredicted RBP18.45■□□□□ 0.54
SH3D21-203ENST00000480549 SLC24A3Q9HC58 644 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 LZTFL1Q9NQ48 299 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 KCNH7Q9NS40 1196 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 RPS6P62753 249 aaKnown RBP18.45■□□□□ 0.54
SH3D21-203ENST00000480549 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 MAP9Q49MG5 647 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 C12orf42Q96LP6 360 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
SH3D21-203ENST00000480549 REXO2Q9Y3B8 237 aaKnown RBP18.45■□□□□ 0.54
SH3D21-203ENST00000480549 EPHB6O15197 1021 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
SH3D21-203ENST00000480549 ZBED4O75132 1171 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 MYBP10242 640 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 ERCC3P19447 782 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 EPS15P42566 896 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 PPP2R3AQ06190 1150 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 REPS2Q8NFH8 660 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 KLRG1Q96E93 195 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 TAAR1Q96RJ0 339 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 BMT2Q1RMZ1 405 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 TKFCQ3LXA3 575 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 PCMTD1Q96MG8 357 aaPredicted RBP18.44■□□□□ 0.54
SH3D21-203ENST00000480549 POLD4Q9HCU8 107 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 EPN1Q9Y6I3 576 aaPredicted RBP18.44■□□□□ 0.54
SH3D21-203ENST00000480549 NEBLO76041 1014 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 NDUFA10O95299 355 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 FDX1P10109 184 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 IQCDQ96DY2 449 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 ZHX2Q9Y6X8 837 aa18.44■□□□□ 0.54
SH3D21-203ENST00000480549 ABL1P00519 1130 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 LMNB1P20700 586 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 ARHGAP25P42331 645 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 ITGB3BPQ13352 177 aaPredicted RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 CALR3Q96L12 384 aaKnown RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 PAPPA2Q9BXP8 1791 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 AGO4Q9HCK5 861 aaKnown RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 JADE2Q9NQC1 790 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 OLFML3Q9NRN5 406 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 PPP2R3BQ9Y5P8 575 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 ECM2O94769 699 aaPredicted RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 GNA14O95837 355 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 PGM5Q15124 567 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 KNOP1Q1ED39 458 aaKnown RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 CCDC40Q4G0X9 1142 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 TTC19Q6DKK2 380 aaPredicted RBP18.43■□□□□ 0.54
SH3D21-203ENST00000480549 KCNV1Q6PIU1 500 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 ARHGAP27Q6ZUM4 889 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 TRIM59Q8IWR1 403 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■□□ 14.9
SH3D21-203ENST00000480549 NACC1Q96RE7 527 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 MYH11P35749 1972 aa18.43■□□□□ 0.54
SH3D21-203ENST00000480549 TBCAO75347 108 aaKnown RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 IBSPP21815 317 aaPredicted RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 HMGCS2P54868 508 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 KCNMA1Q12791 1236 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 LXNQ9BS40 222 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 ADAMTS5Q9UNA0 930 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 LOC285556D6RIA3 1793 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 MAP2K7O14733 419 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 PPFIA4O75335 1185 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 PRPF6O94906 941 aaKnown RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 ADAM9Q13443 819 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 GAP43P17677 238 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 EIF2AK2P19525 551 aaKnown RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 USP8P40818 1118 aa18.42■□□□□ 0.54
SH3D21-203ENST00000480549 TSR1Q2NL82 804 aaKnown RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
SH3D21-203ENST00000480549 SFI1A8K8P3 1242 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 HNRNPH3P31942 346 aaKnown RBP18.41■□□□□ 0.54
SH3D21-203ENST00000480549 NOL9Q5SY16 702 aaKnown RBP18.41■□□□□ 0.54
SH3D21-203ENST00000480549 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 NEK9Q8TD19 979 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 PURBQ96QR8 312 aaKnown RBP18.41■□□□□ 0.54
SH3D21-203ENST00000480549 FAM207AQ9NSI2 230 aaPredicted RBP18.41■□□□□ 0.54
SH3D21-203ENST00000480549 ASTN1O14525 1302 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 PTPRFP10586 1907 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 DSG3P32926 999 aa18.41■□□□□ 0.54
SH3D21-203ENST00000480549 CDK17Q00537 523 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms