RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TSHZ2Q9NRE2 1034 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 RGS18Q9NS28 235 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 SORCS3Q9UPU3 1222 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 GINS2Q9Y248 185 aa18.41■□□□□ 0.54
DDX56-210ENST00000479440 PLXNA3P51805 1871 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 GPR182O15218 404 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 MGEA5O60502 916 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 PDGFBP01127 241 aaPredicted RBP18.4■□□□□ 0.54
DDX56-210ENST00000479440 STAT5BP51692 787 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 PLCB3Q01970 1234 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 NUCB1Q02818 461 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 LLGL2Q6P1M3 1020 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 CASP10Q92851 521 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 NECTIN4Q96NY8 510 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 ADAM2Q99965 735 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 ATP6V0A4Q9HBG4 840 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 NGRNQ9NPE2 291 aaKnown RBP18.4■□□□□ 0.54
DDX56-210ENST00000479440 NFASCO94856 1347 aa18.4■□□□□ 0.54
DDX56-210ENST00000479440 FNDC1Q4ZHG4 1894 aaPredicted RBP18.39■□□□□ 0.54
DDX56-210ENST00000479440 PRR23AA6NEV1 266 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 C9IYK1 514 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 E7EWF7 191 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 PPM1AP35813 382 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 NBL1P41271 181 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 ACTR2P61160 394 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 UBE2SQ16763 222 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 FAM102BQ5T8I3 360 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 CES5AQ6NT32 575 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 SYCE2Q6PIF2 218 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 ASCL5Q7RTU5 278 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 APOL5Q9BWW9 433 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 TYW1Q9NV66 732 aaKnown RBP18.39■□□□□ 0.53
DDX56-210ENST00000479440 TMEM161AQ9NX61 479 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 HCSTQ9UBK5 93 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
DDX56-210ENST00000479440 BAZ2BQ9UIF8 2168 aaKnown RBP18.39■□□□□ 0.53
DDX56-210ENST00000479440 ZDBF2Q9HCK1 2354 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 HOXA2O43364 376 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 PDE4AP27815 886 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 RUFY2Q8WXA3 655 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 CWH43Q9H720 699 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 ELAC1Q9H777 363 aaKnown RBP18.38■□□□□ 0.53
DDX56-210ENST00000479440 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
DDX56-210ENST00000479440 COL1A2P08123 1366 aa18.38■□□□□ 0.53
DDX56-210ENST00000479440 HBP1O60381 514 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 FGFR1P11362 822 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 ANTXR2P58335 489 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 KRT17Q04695 432 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 ITIH3Q06033 890 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 CASC1Q6TDU7 716 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 IGDCC4Q8TDY8 1250 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 MXRA8Q9BRK3 442 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 TMEM117Q9H0C3 514 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 LY9Q9HBG7 655 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 ST3GAL5Q9UNP4 418 aa18.37■□□□□ 0.53
DDX56-210ENST00000479440 PLEKHA8P1O95397 391 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 BRD1O95696 1058 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 KLRC1P26715 233 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 ERMP1Q7Z2K6 904 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 TMC7Q7Z402 723 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
DDX56-210ENST00000479440 ABI1Q8IZP0 508 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 TMEM105Q8N8V8 129 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 TDRD5Q8NAT2 981 aaKnown RBP18.36■□□□□ 0.53
DDX56-210ENST00000479440 TMEM40Q8WWA1 233 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 MFSD1Q9H3U5 465 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 POMKQ9H5K3 350 aa18.36■□□□□ 0.53
DDX56-210ENST00000479440 HIDE1A8MVS5 230 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 C2CD4DB7Z1M9 353 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 CALM1P0DP23 149 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 CALM2P0DP24 149 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 CALM3P0DP25 149 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 MTHFRP42898 656 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
DDX56-210ENST00000479440 KCNT2Q6UVM3 1135 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 SRBD1Q8N5C6 995 aaKnown RBP18.35■□□□□ 0.53
DDX56-210ENST00000479440 ADAM7Q9H2U9 754 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 HCFC2Q9Y5Z7 792 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
DDX56-210ENST00000479440 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 BACH1O14867 736 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 CRYBB1P53674 252 aaPredicted RBP18.34■□□□□ 0.53
DDX56-210ENST00000479440 PTH1RQ03431 593 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 ASTLQ6HA08 431 aaPredicted RBP18.34■□□□□ 0.53
DDX56-210ENST00000479440 HEATR3Q7Z4Q2 680 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
DDX56-210ENST00000479440 NKD2Q969F2 451 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms