RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 DDX25Q9UHL0 483 aaKnown RBP10.26□□□□□ -0.77
CMTM1-208ENST00000479381 CEP131Q9UPN4 1083 aa10.26□□□□□ -0.77
CMTM1-208ENST00000479381 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
CMTM1-208ENST00000479381 TRPV2Q9Y5S1 764 aa10.26□□□□□ -0.77
CMTM1-208ENST00000479381 CDY2AQ9Y6F7 541 aa10.26□□□□□ -0.77
CMTM1-208ENST00000479381 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
CMTM1-208ENST00000479381 RANBP2P49792 3224 aaKnown RBP10.26□□□□□ -0.77
CMTM1-208ENST00000479381 TET1Q8NFU7 2136 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 MYO9BQ13459 2157 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 CCNT1O60563 726 aaKnown RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 TDP2O95551 362 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 USP11P51784 963 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 JAK3P52333 1124 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 RBL2Q08999 1139 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 TRIM71Q2Q1W2 868 aaKnown RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 ATP8B4Q8TF62 1192 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 APBB2Q92870 758 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 CTAGE1Q96RT6 745 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 MAP7D2Q96T17 732 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 DISC1Q9NRI5 854 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-208ENST00000479381 AKT3Q9Y243 479 aa10.25□□□□□ -0.77
CMTM1-208ENST00000479381 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 MSH4O15457 936 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 BAG4O95429 457 aaKnown RBP10.24□□□□□ -0.77
CMTM1-208ENST00000479381 LARGE1O95461 756 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 CCNE2O96020 404 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 CXCL10P02778 98 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 KLRC1P26715 233 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 TMOD1P28289 359 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 SFNP31947 248 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 NFX1Q12986 1120 aaKnown RBP10.24□□□□□ -0.77
CMTM1-208ENST00000479381 PAK2Q13177 524 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 ME3Q16798 604 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 ZNF484Q5JVG2 852 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
CMTM1-208ENST00000479381 DAGLBQ8NCG7 672 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 GJA10Q969M2 543 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 PCYT2Q99447 389 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 LRFN2Q9ULH4 789 aa10.24□□□□□ -0.77
CMTM1-208ENST00000479381 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 JAK2O60674 1132 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 CSPG5O95196 566 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 CIITAP33076 1130 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 PRKCEQ02156 737 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 MBTPS1Q14703 1052 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 MTERF2Q49AM1 385 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 PLEKHG4Q58EX7 1191 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 ODR4Q5SWX8 454 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 NCAPH2Q6IBW4 605 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 MTHFD1LQ6UB35 978 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 ABHD15Q6UXT9 468 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.23□□□□□ -0.77
CMTM1-208ENST00000479381 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
CMTM1-208ENST00000479381 C8orf76Q96K31 380 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 RAD9AQ99638 391 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 PHF20Q9BVI0 1012 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 UNC45AQ9H3U1 944 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 GJB4Q9NTQ9 266 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 LIMCH1Q9UPQ0 1083 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 COL1A2P08123 1366 aa10.23□□□□□ -0.77
CMTM1-208ENST00000479381 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 DENND3A2RUS2 1198 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 RFXAPO00287 272 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 DKC1O60832 514 aaKnown RBP eCLIP10.22□□□□□ -0.77
CMTM1-208ENST00000479381 GJB5O95377 273 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 CHRNA1P02708 482 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 OATP04181 439 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
CMTM1-208ENST00000479381 HOXC8P31273 242 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 CD52P31358 61 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 E2F4Q16254 413 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 Q4G0T1 1027 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 SPOUT1Q5T280 376 aaKnown RBP10.22□□□□□ -0.77
CMTM1-208ENST00000479381 TSHZ1Q6ZSZ6 1077 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 ZSCAN31Q96LW9 406 aaPredicted RBP10.22□□□□□ -0.77
CMTM1-208ENST00000479381 RIT2Q99578 217 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 INSL6Q9Y581 213 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
CMTM1-208ENST00000479381 SZT2Q5T011 3432 aa10.21□□□□□ -0.77
CMTM1-208ENST00000479381 EVPLQ92817 2033 aa10.21□□□□□ -0.77
CMTM1-208ENST00000479381 LCHNA4D1U4 455 aa10.21□□□□□ -0.77
CMTM1-208ENST00000479381 MBLAC1A4D2B0 266 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms