RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 CCDC42Q96M95 316 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.95
VAPB-205ENST00000476395 EYA3Q99504 573 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 ANKRD2Q9GZV1 360 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 NEUROG2Q9H2A3 272 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 PCDHGC5Q9Y5F6 944 aa9.15□□□□□ -0.95
VAPB-205ENST00000476395 FRMPD2Q68DX3 1309 aaPredicted RBP9.15□□□□□ -0.95
VAPB-205ENST00000476395 H0YGN5 161 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 TRAPPC3O43617 180 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 FTCDO95954 541 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 LINGO3P0C6S8 592 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 CASP5P51878 434 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 KIF5AQ12840 1032 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 XRCC4Q13426 336 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GNPTABQ3T906 1256 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 MEI1Q5TIA1 1274 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 MIS18BP1Q6P0N0 1132 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 DZIP1Q86YF9 867 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 KLHL7Q8IXQ5 586 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 ANKRD13AQ8IZ07 590 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 CCT6BQ92526 530 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 RSRC1Q96IZ7 334 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 MAGEC2Q9UBF1 373 aaPredicted RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 NFS1Q9Y697 457 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GAKO14976 1311 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 A0A087X0T9 212 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GRID2IPA4D2P6 1211 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 TMCO5BA8MYB1 307 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 FAM228BP0C875 321 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 BTDP43251 543 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GNAQP50148 359 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GPSM2P81274 684 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 COASYQ13057 564 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 CCDC70Q6NSX1 233 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SPATS2Q86XZ4 545 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 MAB21L3Q8N8X9 362 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 RUBCNQ92622 972 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 CPSF2Q9P2I0 782 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SSU72P8A0A1W2PR75 194 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SMNDC1O75940 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
VAPB-205ENST00000476395 IL1R1P14778 569 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 RAB27AP51159 221 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 ODF2Q5BJF6 829 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 SCFD1Q8WVM8 642 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 SAAL1Q96ER3 474 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 GJD4Q96KN9 370 aaPredicted RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 TSGA10Q9BZW7 698 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 MKNK2Q9HBH9 465 aa9.14□□□□□ -0.95
VAPB-205ENST00000476395 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 ZNFX1Q9P2E3 1918 aaKnown RBP9.14□□□□□ -0.95
VAPB-205ENST00000476395 NT5C2P49902 561 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 LRRC63Q05C16 580 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 PDIA5Q14554 519 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 NAB2Q15742 525 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 UBE2SQ16763 222 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 IRF2BP2Q7Z5L9 587 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 ERICH1Q86X53 443 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 LRRC57Q8N9N7 239 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 SH3GL3Q99963 347 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 LZTS2Q9BRK4 669 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 JMJD4Q9H9V9 463 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 TRPC5Q9UL62 973 aaPredicted RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 RAD51CO43502 376 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 PALMO75781 387 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 HSD17B3P37058 310 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 USP4Q13107 963 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 ORC2Q13416 577 aaPredicted RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 HLTFQ14527 1009 aaKnown RBP eCLIP9.13□□□□□ -0.95
VAPB-205ENST00000476395 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 CACNA2D3Q8IZS8 1091 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 REXO1Q8N1G1 1221 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 EBF2Q9HAK2 575 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 TMBIM4Q9HC24 238 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 HYOU1Q9Y4L1 999 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 SNUPNO95149 360 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 MAGOHP61326 146 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 ZNF844Q08AG5 666 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 CALCRLQ16602 461 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 UBAP2Q5T6F2 1119 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 TRIM68Q6AZZ1 485 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 SV2BQ7L1I2 683 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 FAM114A1Q8IWE2 563 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 MREGQ8N565 214 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms