RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 B3GNT9Q6UX72 402 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 RUFY4Q6ZNE9 571 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
RNF220-210ENST00000474394 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 NRBP2Q9NSY0 501 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 SMC3Q9UQE7 1217 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
RNF220-210ENST00000474394 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 NEMFO60524 1076 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 GPR37L1O60883 481 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 BAIAP3O94812 1187 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 GJB2P29033 226 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 PRKCEQ02156 737 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 GPNMBQ14956 572 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 CALCRLQ16602 461 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 FAM26DQ5JW98 314 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 CNKSR3Q6P9H4 555 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 NOSTRINQ8IVI9 506 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 DNAJB3Q8WWF6 145 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 HAS1Q92839 578 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 PBX4Q9BYU1 374 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 NOL7Q9UMY1 257 aaKnown RBP12.11□□□□□ -0.47
RNF220-210ENST00000474394 PCDHA2Q9Y5H9 948 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 TRANK1O15050 2925 aa12.11□□□□□ -0.47
RNF220-210ENST00000474394 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 SMIM35A0A1B0GVV1 85 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 H3BQV1 296 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 M0QZ92 97 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 ZNF862O60290 1169 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 DKC1O60832 514 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF220-210ENST00000474394 EFCAB14O75071 495 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 OATP04181 439 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 KLRC1P26715 233 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 PBX2P40425 430 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 TRAPPC10P48553 1259 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 MRE11P49959 708 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 TFF2Q03403 129 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 ORC2Q13416 577 aaPredicted RBP12.1□□□□□ -0.47
RNF220-210ENST00000474394 MBTPS1Q14703 1052 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 UGCGQ16739 394 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 NME8Q8N427 588 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 FAM49AQ9H0Q0 323 aaPredicted RBP12.1□□□□□ -0.47
RNF220-210ENST00000474394 VAV3Q9UKW4 847 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 PCDHA12Q9UN75 941 aa12.1□□□□□ -0.47
RNF220-210ENST00000474394 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 ZBTB42B2RXF5 422 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 EML1O00423 815 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 WNT7AO00755 349 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 MAGEB2O15479 319 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 CHRNA1P02708 482 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 P4HBP07237 508 aaKnown RBP12.09□□□□□ -0.47
RNF220-210ENST00000474394 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNF220-210ENST00000474394 MCM7P33993 719 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 KCNJ6P48051 423 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 KCNQ1P51787 676 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 PSMC5P62195 406 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
RNF220-210ENST00000474394 CUL4AQ13619 759 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 IKBKEQ14164 716 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 EPHA7Q15375 998 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 XKR3Q5GH77 459 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 IER5Q5VY09 327 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 SEPT8Q92599 483 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 SLC9A7Q96T83 725 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
RNF220-210ENST00000474394 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 C22orf31O95567 290 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 TXKP42681 527 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 QARSP47897 775 aaKnown RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 MGAT3Q09327 533 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 ZNF174Q15697 407 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 RAB30Q15771 203 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 LARP1BQ659C4 914 aaKnown RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 PHOSPHO2Q8TCD6 241 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 APBB2Q92870 758 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 TTC12Q9H892 705 aaPredicted RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
RNF220-210ENST00000474394 MSRAQ9UJ68 235 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.48
RNF220-210ENST00000474394 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
RNF220-210ENST00000474394 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms