RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TMEM62Q0P6H9 643 aa20.98■□□□□ 0.95
CCDC171-206ENST00000474193 CCDC85BQ15834 202 aaPredicted RBP20.98■□□□□ 0.95
CCDC171-206ENST00000474193 NEK8Q86SG6 692 aa20.98■□□□□ 0.95
CCDC171-206ENST00000474193 METTL13Q8N6R0 699 aa20.98■□□□□ 0.95
CCDC171-206ENST00000474193 RNF216Q9NWF9 866 aaPredicted RBP20.98■□□□□ 0.95
CCDC171-206ENST00000474193 DTNBO60941 627 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 BAG4O95429 457 aaKnown RBP20.97■□□□□ 0.95
CCDC171-206ENST00000474193 TDP2O95551 362 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 CUL4AQ13619 759 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 PIK3AP1Q6ZUJ8 805 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 ZNF710Q8N1W2 664 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 MICALL1Q8N3F8 863 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 GINS2Q9Y248 185 aa20.97■□□□□ 0.95
CCDC171-206ENST00000474193 MICAL3Q7RTP6 2002 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 DLL1O00548 723 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 CCNT1O60563 726 aaKnown RBP20.96■□□□□ 0.95
CCDC171-206ENST00000474193 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCDC171-206ENST00000474193 PSMD10O75832 226 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 PAK2Q13177 524 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 ADGRE1Q14246 886 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 NPY5RQ15761 445 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 PPP4R3AQ6IN85 833 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 ZBTB10Q96DT7 871 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 INTS4Q96HW7 963 aaKnown RBP20.96■□□□□ 0.95
CCDC171-206ENST00000474193 FAM20AQ96MK3 541 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 SAMD11Q96NU1 681 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 MAP7D2Q96T17 732 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 UNC45AQ9H3U1 944 aa20.96■□□□□ 0.95
CCDC171-206ENST00000474193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.95■□□□□ 0.94
CCDC171-206ENST00000474193 LCHNA4D1U4 455 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 ENPP3O14638 875 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 OATP04181 439 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 ATP4AP20648 1035 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 GJB2P29033 226 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 CD52P31358 61 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 ERVK-21P61565 698 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 HTRA4P83105 476 aaPredicted RBP20.95■□□□□ 0.94
CCDC171-206ENST00000474193 SAFBQ15424 915 aaKnown RBP eCLIP20.95■□□□□ 0.94
CCDC171-206ENST00000474193 C8orf76Q96K31 380 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 MBOAT7Q96N66 472 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 OSBPL7Q9BZF2 842 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 KDM3AQ9Y4C1 1321 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 COL6A3P12111 3177 aa20.95■□□□□ 0.94
CCDC171-206ENST00000474193 LINC01553A4QN01 128 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 RFXAPO00287 272 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 EDIL3O43854 480 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 RPS6KA5O75582 802 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 STAG3L1P0CL83 205 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 POU3F3P20264 500 aaPredicted RBP20.94■□□□□ 0.94
CCDC171-206ENST00000474193 FOSBP53539 338 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 PRKCEQ02156 737 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 NFX1Q12986 1120 aaKnown RBP20.94■□□□□ 0.94
CCDC171-206ENST00000474193 MKRN4PQ13434 485 aaPredicted RBP20.94■□□□□ 0.94
CCDC171-206ENST00000474193 SKIV2LQ15477 1246 aaKnown RBP20.94■□□□□ 0.94
CCDC171-206ENST00000474193 KIAA0319LQ8IZA0 1049 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 LMCD1Q9NZU5 365 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 MTUS1Q9ULD2 1270 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 PADI3Q9ULW8 664 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 IGSF9BQ9UPX0 1349 aa20.94■□□□□ 0.94
CCDC171-206ENST00000474193 TBX3O15119 743 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 GPR182O15218 404 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 ANP32AP39687 249 aaKnown RBP20.93■□□□□ 0.94
CCDC171-206ENST00000474193 TBC1D8BQ0IIM8 1120 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 XKR3Q5GH77 459 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 EFCAB12Q6NXP0 572 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 SLFN12Q8IYM2 578 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 SYMPKQ92797 1274 aaKnown RBP20.93■□□□□ 0.94
CCDC171-206ENST00000474193 AKT3Q9Y243 479 aa20.93■□□□□ 0.94
CCDC171-206ENST00000474193 C22orf31O95567 290 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 DNM2P50570 870 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 CRYBB1P53674 252 aaPredicted RBP20.92■□□□□ 0.94
CCDC171-206ENST00000474193 CDC42EP1Q00587 391 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 GRB10Q13322 594 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 FIBCD1Q8N539 461 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 FBXO22Q8NEZ5 403 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 ETNPPLQ8TBG4 499 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 OXER1Q8TDS5 423 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 GJA10Q969M2 543 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 AGO3Q9H9G7 860 aaKnown RBP20.92■□□□□ 0.94
CCDC171-206ENST00000474193 GJB4Q9NTQ9 266 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 FOXD4L1Q9NU39 408 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 DAXXQ9UER7 740 aaPredicted RBP20.92■□□□□ 0.94
CCDC171-206ENST00000474193 LRFN2Q9ULH4 789 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 MTCH2Q9Y6C9 303 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 PTPRSQ13332 1948 aa20.92■□□□□ 0.94
CCDC171-206ENST00000474193 ZBTB42B2RXF5 422 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 H3BQV1 296 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 MMP1P03956 469 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 PDCP20941 246 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 PSMC5P62195 406 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 GNL2Q13823 731 aaKnown RBP20.91■□□□□ 0.94
CCDC171-206ENST00000474193 KRT40Q6A162 431 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 SP7Q8TDD2 431 aaPredicted RBP20.91■□□□□ 0.94
CCDC171-206ENST00000474193 EVPLQ92817 2033 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 SCLT1Q96NL6 688 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 JPH2Q9BR39 696 aaPredicted RBP20.91■□□□□ 0.94
CCDC171-206ENST00000474193 SUGCTQ9HAC7 445 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 THEGQ9P2T0 379 aa20.91■□□□□ 0.94
CCDC171-206ENST00000474193 SEPT9Q9UHD8 586 aaPredicted RBP20.91■□□□□ 0.94
CCDC171-206ENST00000474193 RWDD3Q9Y3V2 267 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms