RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CHST13Q8NET6 341 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 ST13P5Q8NFI4 369 aaPredicted RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 GPATCH3Q96I76 525 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 DHRS1Q96LJ7 313 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 FEZ1Q99689 392 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 SPATA25Q9BR10 227 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 ANTXR1Q9H6X2 564 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 PHAXQ9H814 394 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 FAM86C1Q9NVL1 165 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 REV1Q9UBZ9 1251 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 CEP131Q9UPN4 1083 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 NR2E3Q9Y5X4 410 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 LTBP3Q9NS15 1303 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 ANKRD30AQ9BXX3 1397 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 DAPK1P53355 1430 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 SMG6Q86US8 1419 aaKnown RBP3.1□□□□□ -1.91
CALD1-216ENST00000473714 ZFHX4Q86UP3 3567 aa3.1□□□□□ -1.91
CALD1-216ENST00000473714 SHISA3A0PJX4 238 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 B2RBV5 119 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 LRRN2O75325 713 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 USP2O75604 605 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 ATE1O95260 518 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 S100BP04271 92 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 PFKLP17858 780 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 TGM1P22735 817 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 KIR2DL1P43626 348 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 KIR2DL2P43627 348 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 NCKAP1LP55160 1127 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 ERVFRD-1P60508 538 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 CLEC16AQ2KHT3 1053 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 SLC6A19Q695T7 634 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 RGMBQ6NW40 437 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 LIPIQ6XZB0 460 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 UNC5AQ6ZN44 842 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 SPATC1Q76KD6 591 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 NLRC3Q7RTR2 1065 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 MRPL41Q8IXM3 137 aaKnown RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 Q8N1X5 172 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 SYNPOQ8N3V7 929 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 TTC9BQ8N6N2 239 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 TTLL6Q8N841 843 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 FAM13CQ8NE31 585 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 MAFAQ8NHW3 353 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 RBM15Q96T37 977 aaKnown RBP eCLIP3.09□□□□□ -1.91
CALD1-216ENST00000473714 APBA2Q99767 749 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 G6PC3Q9BUM1 346 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 SPATA9Q9BWV2 254 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 BRINP2Q9C0B6 783 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 KLHL14Q9P2G3 628 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 SUSD2Q9UGT4 822 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 PCDHB10Q9UN67 800 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 POLR3KQ9Y2Y1 108 aaPredicted RBP3.09□□□□□ -1.91
CALD1-216ENST00000473714 SUGT1Q9Y2Z0 365 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 MSRB2Q9Y3D2 182 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 CORINQ9Y5Q5 1042 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 RPGRIP1LQ68CZ1 1315 aa3.09□□□□□ -1.91
CALD1-216ENST00000473714 EIF3AQ14152 1382 aaKnown RBP3.09□□□□□ -1.92
CALD1-216ENST00000473714 CACNA1SQ13698 1873 aa3.09□□□□□ -1.92
CALD1-216ENST00000473714 ANKRD50Q9ULJ7 1429 aa3.09□□□□□ -1.92
CALD1-216ENST00000473714 NCOR1O75376 2440 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 MAP2P11137 1827 aaKnown RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ATRXP46100 2492 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 GFRA2O00451 464 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 DIAPH1O60610 1272 aaKnown RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 TP53P04637 393 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 MYCLP1P12525 358 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 GYS1P13807 737 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 NME1P15531 152 aaKnown RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ITGB8P26012 769 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 LIMS1P48059 325 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 NHLH1Q02575 133 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 RAB3GAP1Q15042 981 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 HSP90AB2PQ58FF8 381 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 TMEM31Q5JXX7 168 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 HEATR6Q6AI08 1181 aaKnown RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 WWC2Q6AWC2 1192 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 OVOS1Q6IE37 1185 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 SPRED1Q7Z699 444 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 ADGRG2Q8IZP9 1017 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 SH3RF3Q8TEJ3 882 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 CHAC2Q8WUX2 184 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 DVL3Q92997 716 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ACSF2Q96CM8 615 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ATG4CQ96DT6 458 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 TMEM87BQ96K49 555 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 GDF15Q99988 308 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 HTATIP2Q9BUP3 242 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 KRTAP3-1Q9BYR8 98 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 KANSL2Q9H9L4 492 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 TMEM260Q9NX78 707 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 STAP2Q9UGK3 403 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 TCEAL9Q9UHQ7 104 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 G3BP2Q9UN86 482 aaKnown RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ZNF281Q9Y2X9 895 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 PTCH2Q9Y6C5 1203 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 DUSP10Q9Y6W6 482 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 RNF123Q5XPI4 1314 aa3.08□□□□□ -1.92
CALD1-216ENST00000473714 POLR3AO14802 1390 aaPredicted RBP3.08□□□□□ -1.92
CALD1-216ENST00000473714 ITGB4P16144 1822 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 AFDNP55196 1824 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms