RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 HSP90AA1P07900 732 aaKnown RBP14.75□□□□□ -0.05
TPM3-216ENST00000473036 SLC26A2P50443 739 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 PRKCEQ02156 737 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 PTGDRQ13258 359 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 GNL2Q13823 731 aaKnown RBP14.75□□□□□ -0.05
TPM3-216ENST00000473036 NCAPH2Q6IBW4 605 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 FAM173BQ6P4H8 233 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 SLFN12Q8IYM2 578 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 ZNF579Q8NAF0 562 aaKnown RBP14.75□□□□□ -0.05
TPM3-216ENST00000473036 SH2D3AQ9BRG2 576 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
TPM3-216ENST00000473036 ARIH1Q9Y4X5 557 aaPredicted RBP14.75□□□□□ -0.05
TPM3-216ENST00000473036 PTPRSQ13332 1948 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
TPM3-216ENST00000473036 HBP1O60381 514 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 SLITRK3O94933 977 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 OATP04181 439 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 PKP1Q13835 747 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 EPHA7Q15375 998 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 TARBP2Q15633 366 aaKnown RBP14.74□□□□□ -0.05
TPM3-216ENST00000473036 AAK1Q2M2I8 961 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 MTHFD1LQ6UB35 978 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 ANO5Q75V66 913 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 CAGE1Q8TC20 777 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 ADAMTS19Q8TE59 1207 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
TPM3-216ENST00000473036 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 HSD17B14Q9BPX1 270 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
TPM3-216ENST00000473036 IL23AQ9NPF7 189 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 TUBE1Q9UJT0 475 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 PCDHA12Q9UN75 941 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 REV3LO60673 3130 aa14.74□□□□□ -0.05
TPM3-216ENST00000473036 ARID2Q68CP9 1835 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 MYH15Q9Y2K3 1946 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 A0A087WWV3 80 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 RRN3P2A6NIE6 340 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 BAG4O95429 457 aaKnown RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 C22orf31O95567 290 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 CHRNA1P02708 482 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 CTSHP09668 335 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 OR52Z1P0C646 297 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 SPATA31C1P0DKV0 1188 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 SELPP16109 830 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 KLRC1P26715 233 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 THPOP40225 353 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 TECP42680 631 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 MGAT3Q09327 533 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 ORC2Q13416 577 aaPredicted RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 BFSP2Q13515 415 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 ZNF365Q70YC5 407 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 LRRC8DQ7L1W4 858 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 LINC01465Q8N7H1 131 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 DNAJB3Q8WWF6 145 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 UHRF1Q96T88 793 aaPredicted RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 EIF2AK1Q9BQI3 630 aaKnown RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 PRDM12Q9H4Q4 367 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 SLC28A3Q9HAS3 691 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 CXXC1Q9P0U4 656 aaPredicted RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 NOL7Q9UMY1 257 aaKnown RBP14.73□□□□□ -0.05
TPM3-216ENST00000473036 PCDHA2Q9Y5H9 948 aa14.73□□□□□ -0.05
TPM3-216ENST00000473036 TRANK1O15050 2925 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 STX6O43752 255 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 MARCH6O60337 910 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 CXCL10P02778 98 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 GNAT1P11488 350 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 PLA2G5P39877 138 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 QARSP47897 775 aaKnown RBP14.72□□□□□ -0.05
TPM3-216ENST00000473036 DRP2Q13474 957 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 ECM1Q16610 540 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 RILPL1Q5EBL4 403 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 ZNF484Q5JVG2 852 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 FAM26DQ5JW98 314 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 PLA2G4FQ68DD2 849 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 DEFB128Q7Z7B8 93 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 RPAINQ86UA6 219 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 CKAP2LQ8IYA6 745 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 KIAA0319LQ8IZA0 1049 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 LXNQ9BS40 222 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
TPM3-216ENST00000473036 FAM49AQ9H0Q0 323 aaPredicted RBP14.72□□□□□ -0.05
TPM3-216ENST00000473036 TCEAL9Q9UHQ7 104 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 COL1A2P08123 1366 aa14.72□□□□□ -0.05
TPM3-216ENST00000473036 XIRP2A4UGR9 3374 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 MED24O75448 989 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 FGBP02675 491 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 P4HBP07237 508 aaKnown RBP14.71□□□□□ -0.05
TPM3-216ENST00000473036 PFKMP08237 780 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 PDCP20941 246 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 PBX2P40425 430 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.058e-7■■■■□ 20
TPM3-216ENST00000473036 NPEPPSP55786 919 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 PSMC5P62195 406 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 ATP2C1P98194 919 aaPredicted RBP14.71□□□□□ -0.05
TPM3-216ENST00000473036 TMEM62Q0P6H9 643 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 RPUSD2Q8IZ73 545 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms