RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 IL16Q14005 1332 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 LNP1A1A4G5 178 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 C2CD2LO14523 706 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 CFBP00751 764 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 HTR4Q13639 388 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 RABL6Q3YEC7 729 aaPredicted RBP11.67□□□□□ -0.54
SPC25-203ENST00000472216 TPRG1Q6ZUI0 275 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 PRICKLE2Q7Z3G6 844 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
SPC25-203ENST00000472216 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
SPC25-203ENST00000472216 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
SPC25-203ENST00000472216 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
SPC25-203ENST00000472216 LOC102724159A0A0B4J2E5 919 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 HAS3O00219 553 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 CDX4O14627 284 aaPredicted RBP11.66□□□□□ -0.54
SPC25-203ENST00000472216 LAMP2P13473 410 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 CR2P20023 1033 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 TIE1P35590 1138 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 IL12RB1P42701 662 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 SATB1Q01826 763 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 HIC1Q14526 733 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 PWP2Q15269 919 aaKnown RBP11.66□□□□□ -0.54
SPC25-203ENST00000472216 WDR6Q9NNW5 1121 aaKnown RBP11.66□□□□□ -0.54
SPC25-203ENST00000472216 RNF146Q9NTX7 359 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
SPC25-203ENST00000472216 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 LAG3P18627 525 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 ITPKBP27987 946 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 ADSSP30520 456 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 ADORA1P30542 326 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 GATMP50440 423 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 CYP4F3Q08477 520 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
SPC25-203ENST00000472216 KBTBD6Q86V97 674 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
SPC25-203ENST00000472216 HSPBP1Q9NZL4 362 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
SPC25-203ENST00000472216 LRFN2Q9ULH4 789 aa11.65□□□□□ -0.54
SPC25-203ENST00000472216 UTP20O75691 2785 aaKnown RBP11.64□□□□□ -0.55
SPC25-203ENST00000472216 F2P00734 622 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 GHRP10912 638 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
SPC25-203ENST00000472216 PDE4AP27815 886 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
SPC25-203ENST00000472216 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 LRRC69Q6ZNQ3 347 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 SPATA5Q8NB90 893 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 SLC22A17Q8WUG5 538 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 TRIM4Q9C037 500 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
SPC25-203ENST00000472216 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
SPC25-203ENST00000472216 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 CXCL14O95715 111 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 CAVIN2O95810 425 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 ALDH5A1P51649 535 aaPredicted RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 GABPAQ06546 454 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 WDR5BQ86VZ2 330 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 GAB3Q8WWW8 586 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 RPP25Q9BUL9 199 aaKnown RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 TYW1Q9NV66 732 aaKnown RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 COL5A1P20908 1838 aaPredicted RBP11.63□□□□□ -0.55
SPC25-203ENST00000472216 TSC2P49815 1807 aa11.63□□□□□ -0.55
SPC25-203ENST00000472216 CLUHO75153 1309 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 KHNYNO15037 678 aaKnown RBP11.62□□□□□ -0.55
SPC25-203ENST00000472216 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
SPC25-203ENST00000472216 GH1P01241 217 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 NDUFV2P19404 249 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 PPM1AP35813 382 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 GNAI1P63096 354 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 ST13P5Q8NFI4 369 aaPredicted RBP11.62□□□□□ -0.55
SPC25-203ENST00000472216 ADAMTS14Q8WXS8 1223 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 SPAG17Q6Q759 2223 aa11.62□□□□□ -0.55
SPC25-203ENST00000472216 FRMPD4Q14CM0 1322 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 MYH1P12882 1939 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 TBKBP1A7MCY6 615 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 PSEN1P49768 467 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 PDE4DQ08499 809 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
SPC25-203ENST00000472216 CHST3Q7LGC8 479 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms