RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 PIBF1Q8WXW3 757 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 TIGD1Q96MW7 591 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 TMPRSS13Q9BYE2 586 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 EHD4Q9H223 541 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 STAP2Q9UGK3 403 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ZMYND8Q9ULU4 1186 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 NR2E3Q9Y5X4 410 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 MCM3APO60318 1980 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 TCRBV5S4A2TA0A5A2 114 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 MPHOSPH10O00566 681 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 GSC2O15499 205 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 IFIT2P09913 472 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 ITPKAP23677 461 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 MAPK4P31152 587 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 PREPP48147 710 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CACNB2Q08289 660 aaPredicted RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 SEPT2Q15019 361 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 SLC9C2Q5TAH2 1124 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 MAP3K21Q5TCX8 1036 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 FDX2Q6P4F2 183 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CATSPERGQ6ZRH7 1159 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CCAR1Q8IX12 1150 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 FAM20CQ8IXL6 584 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 USP6NLQ92738 828 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 KIF1BPQ96EK5 621 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 C12orf42Q96LP6 360 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 APBA2Q99767 749 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 USP26Q9BXU7 913 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CRNKL1Q9BZJ0 848 aaKnown RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 C11orf49Q9H6J7 331 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 RPAP3Q9H6T3 665 aaPredicted RBP6.53□□□□□ -1.36
CMTM1-207ENST00000465057 ARMT1Q9H993 441 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CABP5Q9NP86 173 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 MCM9Q9NXL9 1143 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 FLRT1Q9NZU1 646 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 BTBD7Q9P203 1132 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 VCANP13611 3396 aa6.53□□□□□ -1.36
CMTM1-207ENST00000465057 CYP2D7A0A087X1C5 515 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 A0A1W2PRG0 241 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 PRKAB2O43741 272 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 SMARCA5O60264 1052 aaPredicted RBP6.52□□□□□ -1.37
CMTM1-207ENST00000465057 MBD4O95243 580 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 DLGAP3O95886 979 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 BMP3P12645 472 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
CMTM1-207ENST00000465057 RGS2P41220 211 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 TNNT3P45378 269 aaPredicted RBP6.52□□□□□ -1.37
CMTM1-207ENST00000465057 USP14P54578 494 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 GABPAQ06546 454 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 SLC20A2Q08357 652 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 LRP8Q14114 963 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 NOLC1Q14978 699 aaKnown RBP eCLIP6.52□□□□□ -1.37
CMTM1-207ENST00000465057 KIAA1755Q5JYT7 1200 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 ZSCAN25Q6NSZ9 544 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 TMC7Q7Z402 723 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 DYNLL2Q96FJ2 89 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 FAM83CQ9BQN1 747 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 KIAA1683Q9H0B3 1180 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 BOLA2Q9H3K6 86 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 ZNF576Q9H609 170 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 CYP4F12Q9HCS2 524 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
CMTM1-207ENST00000465057 ZBTB40Q9NUA8 1239 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 PAG1Q9NWQ8 432 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 OGDHLQ9ULD0 1010 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 SYNPO2Q9UMS6 1093 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 HIF3AQ9Y2N7 669 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 RABGAP1Q9Y3P9 1069 aa6.52□□□□□ -1.37
CMTM1-207ENST00000465057 PRPF40AO75400 957 aaKnown RBP6.51□□□□□ -1.37
CMTM1-207ENST00000465057 REC8O95072 547 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 TIAF1O95411 115 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 AKR1B1P15121 316 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 ADD2P35612 726 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 NUCB1Q02818 461 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 TEX35Q5T0J7 233 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 GIMAP6Q6P9H5 292 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 CHD1LQ86WJ1 897 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 SPICE1Q8N0Z3 855 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
CMTM1-207ENST00000465057 NPLOC4Q8TAT6 608 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 TANGO6Q9C0B7 1094 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 ABCB6Q9NP58 842 aa6.51□□□□□ -1.37
CMTM1-207ENST00000465057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.51□□□□□ -1.37
CMTM1-207ENST00000465057 PRUNE2Q8WUY3 3088 aa6.5□□□□□ -1.37
CMTM1-207ENST00000465057 SYCE3A1L190 88 aa6.5□□□□□ -1.37
CMTM1-207ENST00000465057 HMX2A2RU54 273 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms