RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 LLGL2Q6P1M3 1020 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 ZNF654Q8IZM8 581 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 KREMEN2Q8NCW0 462 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 RASGRP4Q8TDF6 673 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
SMC1A-204ENST00000463684 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 ATP6V0A4Q9HBG4 840 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 ERVK-5Q9HDB9 667 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 ENTPD7Q9NQZ7 604 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 KCNH7Q9NS40 1196 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 CFAP54Q96N23 3096 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 MGEA5O60502 916 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 PDGFBP01127 241 aaPredicted RBP16.54■□□□□ 0.24
SMC1A-204ENST00000463684 SLC26A2P50443 739 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 ACTR2P61160 394 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 KRT17Q04695 432 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 MTMR3Q13615 1198 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 KCNC3Q14003 757 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 UBE2SQ16763 222 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 UBALD2Q8IYN6 164 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 TCF25Q9BQ70 676 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 NGRNQ9NPE2 291 aaKnown RBP16.54■□□□□ 0.24
SMC1A-204ENST00000463684 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
SMC1A-204ENST00000463684 NOC2LQ9Y3T9 749 aaKnown RBP16.54■□□□□ 0.24
SMC1A-204ENST00000463684 NFASCO94856 1347 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
SMC1A-204ENST00000463684 C9IYK1 514 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 PTH1RQ03431 593 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 APOBRQ0VD83 1088 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 CES5AQ6NT32 575 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 SYCE2Q6PIF2 218 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 NFXL1Q6ZNB6 911 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
SMC1A-204ENST00000463684 MXRA8Q9BRK3 442 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 CWH43Q9H720 699 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 TMEM161AQ9NX61 479 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 SORCS3Q9UPU3 1222 aa16.53■□□□□ 0.24
SMC1A-204ENST00000463684 HBP1O60381 514 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 PLEKHA8P1O95397 391 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 IGHDP01880 384 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 FGFR1P11362 822 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 ANTXR2P58335 489 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 TMC7Q7Z402 723 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.24
SMC1A-204ENST00000463684 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 CASP10Q92851 521 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 NECTIN4Q96NY8 510 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 ELAC1Q9H777 363 aaKnown RBP16.52■□□□□ 0.24
SMC1A-204ENST00000463684 CDHR5Q9HBB8 845 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
SMC1A-204ENST00000463684 ZFHX2Q9C0A1 2572 aaPredicted RBP16.52■□□□□ 0.23
SMC1A-204ENST00000463684 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.23
SMC1A-204ENST00000463684 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 HIDE1A8MVS5 230 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 BACH1O14867 736 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 HOXA2O43364 376 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 CALM1P0DP23 149 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 CALM2P0DP24 149 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 CALM3P0DP25 149 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 PDE4AP27815 886 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 PPM1AP35813 382 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 FAM189BP81408 668 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 ITIH3Q06033 890 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 ASCL5Q7RTU5 278 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 TMEM40Q8WWA1 233 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 KIAA1671Q9BY89 1806 aa16.51■□□□□ 0.23
SMC1A-204ENST00000463684 ATG7O95352 703 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 ARP10275 920 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 NBL1P41271 181 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
SMC1A-204ENST00000463684 ZNF484Q5JVG2 852 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
SMC1A-204ENST00000463684 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 ZNF558Q96NG5 402 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 ADAM7Q9H2U9 754 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 MFSD1Q9H3U5 465 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
SMC1A-204ENST00000463684 hCG_1642624A0A1W2PR95 340 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 PRR23AA6NEV1 266 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 C2CD4DB7Z1M9 353 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 BRD1O95696 1058 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 SMC1AQ14683 1233 aaKnown RBP16.49■□□□□ 0.23
SMC1A-204ENST00000463684 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
SMC1A-204ENST00000463684 KIZQ2M2Z5 673 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms