RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 DUSP10Q9Y6W6 482 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 H3BQF6 201 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SASH3O75995 380 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 EYA4O95677 639 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 DEPTORQ8TB45 409 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SEMA6BQ9H3T3 888 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SLITRK6Q9H5Y7 841 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 BAZ2BQ9UIF8 2168 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TBX3O15119 743 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 ECEL1O95672 775 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 PRLRP16471 622 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 DPH6Q7L8W6 267 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 MRRFQ96E11 262 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 HOOK2Q96ED9 719 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 ATP6V1G3Q96LB4 118 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 EIF2AK1Q9BQI3 630 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 BAIAP2L1Q9UHR4 511 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 HNRNPDLO14979 420 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 UCHL3P15374 230 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 ATP11AP98196 1134 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 NAB2Q15742 525 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 SLC16A3O15427 465 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 MAPK4P31152 587 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TMEM139Q8IV31 216 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TRIM11Q96F44 468 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 SMARCAL1Q9NZC9 954 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 TMOD4Q9NZQ9 345 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 SYNGAP1Q96PV0 1343 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 LRRIQ3A6PVS8 624 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-202ENST00000460657 SGO2Q562F6 1265 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 HHATQ5VTY9 493 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 FYB2Q5VWT5 728 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 CAPN6Q9Y6Q1 641 aa13.05□□□□□ -0.32
CPNE6-202ENST00000460657 HGSO14964 777 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 RFFLQ8WZ73 363 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 RAB20Q9NX57 234 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 PODXLO00592 558 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 IFNAR2P48551 515 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 IRX3P78415 501 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 UAP1Q16222 522 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 FAM81BQ96LP2 452 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 KLRC1P26715 233 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 SOX5P35711 763 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 GLYCTKQ8IVS8 523 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
CPNE6-202ENST00000460657 VPS37BQ9H9H4 285 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 KMT5AQ9NQR1 393 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 KLHL14Q9P2G3 628 aa13.04□□□□□ -0.32
CPNE6-202ENST00000460657 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
CPNE6-202ENST00000460657 ACTN1P12814 892 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 CD19P15391 556 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 FUT2Q10981 343 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 TBC1D10BQ4KMP7 808 aaPredicted RBP13.03□□□□□ -0.32
CPNE6-202ENST00000460657 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 NEBLO76041 1014 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 VPS72Q15906 364 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 P3H4Q92791 437 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 INTS2Q9H0H0 1204 aaKnown RBP13.03□□□□□ -0.32
CPNE6-202ENST00000460657 TDRD3Q9H7E2 651 aaKnown RBP13.03□□□□□ -0.32
CPNE6-202ENST00000460657 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 RGL2O15211 777 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 RFX1P22670 979 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 GPC5P78333 572 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 RASGRF2O14827 1237 aa13.03□□□□□ -0.32
CPNE6-202ENST00000460657 MMP10P09238 476 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms