RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZEB2O60315 1214 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 BRINP1O60477 761 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 GAS7O60861 476 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 FZD7O75084 574 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 CLASP2O75122 1294 aaKnown RBP4.76□□□□□ -1.65
RFC4-211ENST00000460408 KRT15P19012 456 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 ID4P47928 161 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 LSSP48449 732 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 STAT4Q14765 748 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 SEC23AQ15436 765 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 ZFPM1Q8IX07 1006 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 CHTF18Q8WVB6 975 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 CDK5RAP1Q96SZ6 601 aaKnown RBP4.76□□□□□ -1.65
RFC4-211ENST00000460408 TTC1Q99614 292 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 ZNF747Q9BV97 191 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 CD244Q9BZW8 370 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 KLC2Q9H0B6 622 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 CD248Q9HCU0 757 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 PPP4R1LQ9P1A2 415 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 ASH2LQ9UBL3 628 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 B3GALT1Q9Y5Z6 326 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 FAM90A27PA6NNH2 459 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 LAMTOR5O43504 91 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 B4GALT3O60512 393 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 MAFKO60675 156 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 FKBP9O95302 570 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 LTFP02788 710 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 HSP90B1P14625 803 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 ITGA1P56199 1179 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 EVA1CP58658 441 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 IRF9Q00978 393 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 ICAM4Q14773 271 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 FKBP9P1Q75LS8 142 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 MILR1Q7Z6M3 343 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 RBM12BQ8IXT5 1001 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 NLGN4XQ8N0W4 816 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 FAM26EQ8N5C1 309 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 ARRDC4Q8NCT1 418 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 DNERQ8NFT8 737 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 TTLL11Q8NHH1 800 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 CLEC4DQ8WXI8 215 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 DLG3Q92796 817 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 USP7Q93009 1102 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 LCORQ96JN0 433 aaPredicted RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 EMC7Q9NPA0 242 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 SPTLC3Q9NUV7 552 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 TYW1Q9NV66 732 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 OXSMQ9NWU1 459 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 THG1LQ9NWX6 298 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 DDX56Q9NY93 547 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 H2AFY2Q9P0M6 372 aaPredicted RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 APOBEC2Q9Y235 224 aaKnown RBP4.75□□□□□ -1.65
RFC4-211ENST00000460408 ZKSCAN5Q9Y2L8 839 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 PCDHB4Q9Y5E5 795 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 ATP23Q9Y6H3 246 aa4.75□□□□□ -1.65
RFC4-211ENST00000460408 ACOT7O00154 380 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 DDX3XO00571 662 aaKnown RBP eCLIP4.74□□□□□ -1.65
RFC4-211ENST00000460408 TGM5O43548 720 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 CPEP16870 476 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 PTPN1P18031 435 aaKnown RBP4.74□□□□□ -1.65
RFC4-211ENST00000460408 TUSC3Q13454 348 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 RNF219Q5W0B1 726 aaPredicted RBP4.74□□□□□ -1.65
RFC4-211ENST00000460408 CD300LDQ6UXZ3 194 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 USP51Q70EK9 711 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 NECAB2Q7Z6G3 386 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 PLEKHH3Q7Z736 793 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 EFHBQ8N7U6 833 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 ATL2Q8NHH9 583 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 WDR66Q8TBY9 1149 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 GPR101Q96P66 508 aaPredicted RBP4.74□□□□□ -1.65
RFC4-211ENST00000460408 PCED1AQ9H1Q7 454 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 VPS11Q9H270 941 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 SPO11Q9Y5K1 396 aa4.74□□□□□ -1.65
RFC4-211ENST00000460408 ALG1L2C9J202 215 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 SCDO00767 359 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 C4BPAP04003 597 aaKnown RBP4.73□□□□□ -1.65
RFC4-211ENST00000460408 SDHAP31040 664 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 GJA4P35212 333 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 IL2P60568 153 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 SART3Q15020 963 aaKnown RBP4.73□□□□□ -1.65
RFC4-211ENST00000460408 STK32CQ86UX6 486 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 ZC3H18Q86VM9 953 aaKnown RBP4.73□□□□□ -1.65
RFC4-211ENST00000460408 SPATS2Q86XZ4 545 aaKnown RBP4.73□□□□□ -1.65
RFC4-211ENST00000460408 TRIM48Q8IWZ4 208 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 KIAA1958Q8N8K9 716 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 KCNH7Q9NS40 1196 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 HSPBP1Q9NZL4 362 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 NUB1Q9Y5A7 615 aa4.73□□□□□ -1.65
RFC4-211ENST00000460408 H7C1D1 291 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 GPR42O15529 346 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 RAB11FIP3O75154 756 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 KRT37O76014 449 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 PDGFRBP09619 1106 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 ZNF28P17035 718 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 SLC9A1P19634 815 aa4.72□□□□□ -1.65
RFC4-211ENST00000460408 KPNA1P52294 538 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms