RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 SRFP11831 508 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 HSD17B4P51659 736 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 SPEM2Q0P670 501 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 ZKSCAN2Q63HK3 967 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 KCNT2Q6UVM3 1135 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 METTL7BQ6UX53 244 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 GPR149Q86SP6 731 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 SLC44A3Q8N4M1 653 aa15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 FAM49AQ9H0Q0 323 aaPredicted RBP15.7■□□□□ 0.1
PCOLCE-202ENST00000460002 ANP32CO43423 234 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 LAMTOR5O43504 91 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 ZIC2O95409 532 aaPredicted RBP15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 KRT17Q04695 432 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 CSTF1Q05048 431 aaKnown RBP15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 TMEM62Q0P6H9 643 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 GRIK4Q16099 956 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 TMEM266Q2M3C6 531 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 SLC22A17Q8WUG5 538 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 SPATA6Q9NWH7 488 aaPredicted RBP15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 MRPL11Q9Y3B7 192 aaKnown RBP15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 TRPV2Q9Y5S1 764 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 CEP295Q9C0D2 2601 aa15.69■□□□□ 0.1
PCOLCE-202ENST00000460002 C1QTNF9BB2RNN3 333 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 FOXP2O15409 715 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 TBC1D4O60343 1298 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 C1QTNF9P0C862 333 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 RLBP1P12271 317 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 QRICH1Q2TAL8 776 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 IER5Q5VY09 327 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 NELL1Q92832 810 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 ZNF558Q96NG5 402 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 ZSCAN32Q9NX65 697 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 GMEB2Q9UKD1 530 aa15.68■□□□□ 0.1
PCOLCE-202ENST00000460002 C9IYK1 514 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 ORC4O43929 436 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 CA8P35219 290 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 PPM1AP35813 382 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 SP4Q02446 784 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 GHRHRQ02643 423 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 NFX1Q12986 1120 aaKnown RBP15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 SEMA3FQ13275 785 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 LETM2Q2VYF4 491 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 LRSAM1Q6UWE0 723 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 CABP7Q86V35 215 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 ADAM2Q99965 735 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 SPG21Q9NZD8 308 aa15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 FLNBO75369 2602 aaKnown RBP15.67■□□□□ 0.1
PCOLCE-202ENST00000460002 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 GDF9O60383 454 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 CXCL14O95715 111 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 ZFYP08048 801 aaPredicted RBP15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 MARK3P27448 753 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 CCND2P30279 289 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 HOXA13P31271 388 aaPredicted RBP15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 NEDD9Q14511 834 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 SLC24A5Q71RS6 500 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 AUTS2Q8WXX7 1259 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 SFXN1Q9H9B4 322 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 RGS18Q9NS28 235 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
PCOLCE-202ENST00000460002 FGRP09769 529 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 STARD6P59095 220 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 IGBP1P78318 339 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 PTPN14Q15678 1187 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 UNQ6494/PRO21346Q6UXR6 183 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 SLC39A11Q8N1S5 342 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 GLG1Q92896 1179 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 CASD1Q96PB1 797 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 ATP6V0A4Q9HBG4 840 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 C1orf112Q9NSG2 853 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 RNF19AQ9NV58 838 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 ANAPC4Q9UJX5 808 aa15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 GCN1Q92616 2671 aaKnown RBP15.65■□□□□ 0.1
PCOLCE-202ENST00000460002 COL4A3Q01955 1670 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 DENND3A2RUS2 1198 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 SPATA31C2B4DYI2 1134 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 M0QZ92 97 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 RAB11FIP3O75154 756 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 LPAL2Q16609 132 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 TSSK4Q6SA08 328 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 KDF1Q8NAX2 398 aaPredicted RBP15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 BCO2Q9BYV7 579 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 TMEM117Q9H0C3 514 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 TMEM161AQ9NX61 479 aa15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 MTF2Q9Y483 593 aaPredicted RBP15.64■□□□□ 0.09
PCOLCE-202ENST00000460002 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
PCOLCE-202ENST00000460002 GBP2P32456 591 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms