RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 C11orf49Q9H6J7 331 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 TUFT1Q9NNX1 390 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 TRMT13Q9NUP7 481 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 ZNF215Q9UL58 517 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 KCNH3Q9ULD8 1083 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 MORC2Q9Y6X9 1032 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 EMSYQ7Z589 1322 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 IGSF9BQ9UPX0 1349 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 TREHO43280 583 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 PLA2G4BP0C869 781 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 CASP1P29466 404 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 TXLNAP40222 546 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 STAT6P42226 847 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 GRIK4Q16099 956 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 LONRF3Q496Y0 759 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 TMEM119Q4V9L6 283 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 NAALADL2Q58DX5 795 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 XKR3Q5GH77 459 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 MARCH8Q5T0T0 291 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 GDF6Q6KF10 455 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 SLC39A5Q6ZMH5 540 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 CLEC17AQ6ZS10 378 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 GRAMD1CQ8IYS0 662 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 NEK9Q8TD19 979 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 MRPS27Q92552 414 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 ZNF668Q96K58 619 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 NACC1Q96RE7 527 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 PPP1R16BQ96T49 567 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 KATNAL1Q9BW62 490 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 SUGCTQ9HAC7 445 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
CLTCL1-204ENST00000458188 A0A0U1RQG5 324 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 A0A1W2PQ27 194 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 A0A1W2PQ64 194 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 A0A1W2PQD8 194 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 C17orf102A2RUQ5 167 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 ARVCFO00192 962 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 HBP1O60381 514 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 DKC1O60832 514 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 CABYRO75952 493 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 COL6A1P12109 1028 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 KLRC1P26715 233 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 MCM4P33991 863 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 SYKP43405 635 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 AFMP43652 599 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 RARRES1P49788 294 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 SLC26A2P50443 739 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 DRP2Q13474 957 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 LRRC26Q2I0M4 334 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 TRIM60Q495X7 471 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 HYIQ5T013 277 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 MTHFD1LQ6UB35 978 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 RUFY4Q6ZNE9 571 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 OTUD6AQ7L8S5 288 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 NECAB2Q7Z6G3 386 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 LRRC71Q8N4P6 559 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 METTL13Q8N6R0 699 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 TMEM87AQ8NBN3 555 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 RAD54LQ92698 747 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 TMEM143Q96AN5 459 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 NIFKQ9BYG3 293 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 FAM49AQ9H0Q0 323 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 CYP26B1Q9NR63 512 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 ATP11BQ9Y2G3 1177 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
CLTCL1-204ENST00000458188 KDM3AQ9Y4C1 1321 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 ARHGEF35A5YM69 484 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 B4GALT4O60513 344 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 NR1I2O75469 434 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 ZNF202O95125 648 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 LYPLA2O95372 231 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 EYA4O95677 639 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 CYP2C9P11712 490 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 CAPN2P17655 700 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 CDK7P50613 346 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 CLCN3P51790 818 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 UBE2HP62256 183 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 TMEM62Q0P6H9 643 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 TARBP2Q15633 366 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 E2F4Q16254 413 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 PTGISQ16647 500 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 ZNF484Q5JVG2 852 aa9.67□□□□□ -0.86
CLTCL1-204ENST00000458188 NFRKBQ6P4R8 1299 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms