RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 USP38Q8NB14 1042 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 SLC35C1Q96A29 364 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 FAM107BQ9H098 131 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 KCNQ5Q9NR82 932 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 GCOM1H8Y6P7 765 aaPredicted RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 MMP10P09238 476 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 H2AFZP0C0S5 128 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 POLR2MP0CAP2 368 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 NOP2P46087 812 aaKnown RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 H2AFVQ71UI9 128 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 OTOP1Q7RTM1 612 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 C1orf131Q8NDD1 294 aaKnown RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 QTRT2Q9H974 415 aaKnown RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 PARVGQ9HBI0 331 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 SMARCAL1Q9NZC9 954 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 GCNT4Q9P109 453 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 ODF2LQ9ULJ1 636 aa16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 COL11A2P13942 1736 aaPredicted RBP16.05■□□□□ 0.16
NT5C3A-208ENST00000456458 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 H0YIN7 160 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 CCDC188H7C350 402 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 LMNB1P20700 586 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 SNAP25P60880 206 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 ENOX2Q16206 610 aaKnown RBP16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 CFAP58Q5T655 872 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 LRCH2Q5VUJ6 765 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 C1orf186Q6ZWK4 172 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 HS2ST1Q7LGA3 356 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 CD302Q8IX05 232 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 FAM186BQ8IYM0 893 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 MYCT1Q8N699 235 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 SLC5A5Q92911 643 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 KRT12Q99456 494 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 NENFQ9UMX5 172 aa16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 MRPL11Q9Y3B7 192 aaKnown RBP16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 RRP15Q9Y3B9 282 aaKnown RBP16.04■□□□□ 0.16
NT5C3A-208ENST00000456458 KCNK3O14649 394 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 OPLAHO14841 1288 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 PSMD10O75832 226 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 GLI1P08151 1106 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 PRELPP51888 382 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 SKOR1P84550 965 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 CUL1Q13616 776 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 MYBPC2Q14324 1141 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 VTI1AQ96AJ9 217 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 BORCS6Q96GS4 357 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 SIX2Q9NPC8 291 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 FRMD4BQ9Y2L6 1034 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
NT5C3A-208ENST00000456458 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 EML1O00423 815 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 TGFB1I1O43294 461 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 PLA2G6O60733 806 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 SLITRK3O94933 977 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 RSPH10BP0C881 870 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 RFX1P22670 979 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 SLC20A2Q08357 652 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 SLFN11Q7Z7L1 901 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 TPH2Q8IWU9 490 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 TPCN2Q8NHX9 752 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 NEK9Q8TD19 979 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 CSRNP1Q96S65 589 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 STK33Q9BYT3 514 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 PCDHAC2Q9Y5I4 1007 aa16.02■□□□□ 0.16
NT5C3A-208ENST00000456458 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.15
NT5C3A-208ENST00000456458 MYO1CO00159 1063 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms