RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 STKLD1Q8NE28 680 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 NLRC4Q9NPP4 1024 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 CDC23Q9UJX2 597 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 MAPK8IP1Q9UQF2 711 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 PDZK1P1A8MUH7 402 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 GRM1Q13255 1194 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 RASGRF1Q13972 1273 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 HIC1Q14526 733 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 RCN1Q15293 331 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
NIPBL-202ENST00000448238 DIDO1Q9BTC0 2240 aaKnown RBP9.53□□□□□ -0.88
NIPBL-202ENST00000448238 E5RI56 91 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 SERPINB3P29508 390 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 MAPK4P31152 587 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 MXD4Q14582 209 aaPredicted RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 THEMISQ8N1K5 641 aaPredicted RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 TUBA8Q9NY65 449 aaPredicted RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 MAP3K2Q9Y2U5 619 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 EPN1Q9Y6I3 576 aaPredicted RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 HPCAP84074 193 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.88
NIPBL-202ENST00000448238 DPP10Q8N608 796 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 PCYOX1LQ8NBM8 494 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 LRWD1Q9UFC0 647 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 ICE1Q9Y2F5 2266 aa9.52□□□□□ -0.88
NIPBL-202ENST00000448238 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 KCNJ18B7U540 433 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 ANGPT2O15123 496 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 KCNJ12Q14500 433 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 KPNB1Q14974 876 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 TTC38Q5R3I4 469 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 METTL13Q8N6R0 699 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 RNF139Q8WU17 664 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 TJP3O95049 919 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 ATP12AP54707 1039 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 FASTKD1Q53R41 847 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 KRT26Q7Z3Y9 468 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 ERICH1Q86X53 443 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 SCFD1Q8WVM8 642 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 SNRKQ9NRH2 765 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 GTSE1Q9NYZ3 720 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 TBK1Q9UHD2 729 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 APPL1Q9UKG1 709 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 YWHABP31946 246 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 C1DQ13901 141 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 HSPH1Q92598 858 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 EME1Q96AY2 570 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 TSSK1BQ9BXA7 367 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 FSD1LQ9BXM9 530 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 EPB41L5Q9HCM4 733 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 EXOSC4Q9NPD3 245 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 PIPSLA2A3N6 862 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 PDE5AO76074 875 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 FYNP06241 537 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 HSD3B2P26439 372 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 MFAP3P55082 362 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 STXBP2Q15833 593 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 CCDC144BQ3MJ40 725 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 TAB2Q9NYJ8 693 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 ASNA1O43681 348 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 GAS7O60861 476 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 MLH1P40692 756 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 ABRAXAS1Q6UWZ7 409 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 DKK3Q9UBP4 350 aa9.52□□□□□ -0.89
NIPBL-202ENST00000448238 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.52□□□□□ -0.89
NIPBL-202ENST00000448238 CYTH3O43739 400 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 RAD23BP54727 409 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 NNTQ13423 1086 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 PKN3Q6P5Z2 889 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 CCDC80Q76M96 950 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 MAST3O60307 1309 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 IBTKQ9P2D0 1353 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 UBAP1LF5GYI3 381 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 RARSP54136 660 aaKnown RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 C2CD6Q53TS8 623 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 WLSQ5T9L3 541 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 ZNF713Q8N859 430 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 REXO1Q8N1G1 1221 aaKnown RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 GANCQ8TET4 914 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 GPR101Q96P66 508 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 RNPEPQ9H4A4 650 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 ZBTB39O15060 712 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 ZBED4O75132 1171 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 KRT1P04264 644 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 MRPL1Q9BYD6 325 aaKnown RBP9.51□□□□□ -0.89
NIPBL-202ENST00000448238 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 HMG20AQ9NP66 347 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 EMC3Q9P0I2 261 aa9.51□□□□□ -0.89
NIPBL-202ENST00000448238 AURKCQ9UQB9 309 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms