RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 CPP00450 1065 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 KRT14P02533 472 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 CCND2P30279 289 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 CLNS1AP54105 237 aaKnown RBP12.28□□□□□ -0.44
PTCH2-203ENST00000447098 HERVK_113P62684 666 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 RNF169Q8NCN4 708 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
PTCH2-203ENST00000447098 NACC1Q96RE7 527 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 CEP83Q9Y592 693 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 CCNA1P78396 465 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 COG2Q14746 738 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 NAA25Q14CX7 972 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 N4BP2L2Q92802 583 aaPredicted RBP12.28□□□□□ -0.44
PTCH2-203ENST00000447098 GLIS2Q9BZE0 524 aaPredicted RBP12.28□□□□□ -0.44
PTCH2-203ENST00000447098 ZMYND12Q9H0C1 365 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 SNX12Q9UMY4 172 aa12.28□□□□□ -0.44
PTCH2-203ENST00000447098 ESYT3A0FGR9 886 aa12.27□□□□□ -0.44
PTCH2-203ENST00000447098 MYZAPP0CAP1 466 aa12.27□□□□□ -0.44
PTCH2-203ENST00000447098 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.44
PTCH2-203ENST00000447098 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.44
PTCH2-203ENST00000447098 GOLGA8IPA6NC78 632 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 GOLGA8JA6NMD2 632 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 YDJCA8MPS7 323 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 ADM5C9JUS6 153 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 SLC37A4O43826 429 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 LIG4P49917 911 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 TNNC1P63316 161 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 DGKZQ13574 1117 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 UBLCP1Q8WVY7 318 aaPredicted RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 OSBPL9Q96SU4 736 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 PCDHA13Q9Y5I0 950 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 PDS5AQ29RF7 1337 aaKnown RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
PTCH2-203ENST00000447098 APBA1Q02410 837 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 CEP55Q53EZ4 464 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 POMGNT1Q8WZA1 660 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 CUEDC2Q9H467 287 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 GAKO14976 1311 aa12.27□□□□□ -0.45
PTCH2-203ENST00000447098 ATRNO75882 1429 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 INO80B-WBP1J3KQ70 363 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 PEX3P56589 373 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 SF3A3Q12874 501 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 DMP1Q13316 513 aaPredicted RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 E2F5Q15329 346 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 HDAC7Q8WUI4 952 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 KRT12Q99456 494 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 INO80BQ9C086 356 aaPredicted RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 EXOC7Q9UPT5 735 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 A0A1B0GUA9 196 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 A0A1W2PQC6 194 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 PDE2AO00408 941 aaPredicted RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 NCK2O43639 380 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 EIF4A3P38919 411 aaKnown RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 OSTNP61366 133 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 KLHL30Q0D2K2 578 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 SNCBQ16143 134 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 APTXQ7Z2E3 356 aaKnown RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 KAT2BQ92831 832 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 WDR46O15213 610 aaKnown RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 NSUN6Q8TEA1 469 aaKnown RBP12.26□□□□□ -0.45
PTCH2-203ENST00000447098 ZIM3Q96PE6 472 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 CD248Q9HCU0 757 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
PTCH2-203ENST00000447098 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 KIF11P52732 1056 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 RPAINQ86UA6 219 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 SPATA20Q8TB22 786 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 EHD2Q9NZN4 543 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 REXO2Q9Y3B8 237 aaKnown RBP12.25□□□□□ -0.45
PTCH2-203ENST00000447098 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 LSP1P33241 339 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 SEC24CP53992 1094 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 ACAD9Q9H845 621 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 NEBLO76041 1014 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 CCNE1P24864 410 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
PTCH2-203ENST00000447098 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
PTCH2-203ENST00000447098 ASIC2Q16515 512 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
PTCH2-203ENST00000447098 PPM1KQ8N3J5 372 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms