RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	NAB2	Q15742	525 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	SLC18A3	Q16572	532 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	EXOC3L4	Q17RC7	722 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	NSMF	Q6X4W1	530 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	DNAJC19	Q96DA6	116 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312		A0A1B0GUA9	196 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312		G3V3G9	751 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	KIF4A	O95239	1232 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	FGFR1OP	O95684	399 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	CP	P00450	1065 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	CLTA	P09496	248 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	GCFC2	P16383	781 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	GJC1	P36383	396 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	CDR1	P51861	262 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	TNIP1	Q15025	636 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	DCAF8	Q5TAQ9	597 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	TPH2	Q8IWU9	490 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	RAB34	Q9BZG1	259 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	EPN3	Q9H201	632 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	JMJD4	Q9H9V9	463 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	GCNT4	Q9P109	453 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	PCDHA1	Q9Y5I3	950 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	NUP98	P52948	1817 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	AKAP3	O75969	853 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	UCHL3	P15374	230 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	FGFR4	P22455	802 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	MTM1	Q13496	603 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	SNX1	Q13596	522 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	SF3B3	Q15393	1217 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	ALS2CL	Q60I27	953 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	SEPT14	Q6ZU15	432 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	ARMC2	Q8NEN0	867 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	AK8	Q96MA6	479 aa		13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	INPP4A	Q96PE3	977 aa	Predicted RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	POP1	Q99575	1024 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	DDX4	Q9NQI0	724 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	DBR1	Q9UK59	544 aa	Known RBP	13.65	□□□□□ -0.22
DDR1-238	ENST00000446312	CTNND1	O60716	968 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	MARCKSL1	P49006	195 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ZNF844	Q08AG5	666 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	CDC37	Q16543	378 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	CAPN12	Q6ZSI9	719 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	CCDC65	Q8IXS2	484 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ANKRD42	Q8N9B4	389 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	MTMR9	Q96QG7	549 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	SH3GLB2	Q9NR46	395 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	KCNQ5	Q9NR82	932 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	CEP72	Q9P209	647 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	G3BP2	Q9UN86	482 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	DNM1L	O00429	736 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	SORBS3	O60504	671 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	IFI35	P80217	286 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	NFIA	Q12857	509 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ASTE1	Q2TB18	679 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	SBK1	Q52WX2	424 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	MEI1	Q5TIA1	1274 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ARHGEF1	Q92888	912 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	C8orf37	Q96NL8	207 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	SH3GL3	Q99963	347 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	DDX20	Q9UHI6	824 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	PPP1R9A	Q9ULJ8	1098 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	IGSF9B	Q9UPX0	1349 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	RBBP5	Q15291	538 aa	Known RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	PPP1R7	Q15435	360 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	C11orf91	Q3C1V1	193 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	B4GALNT4	Q76KP1	1039 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	TAB3	Q8N5C8	712 aa	Predicted RBP	13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	RAPGEF5	Q92565	580 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ZBTB10	Q96DT7	871 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	REEP2	Q9BRK0	252 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	KIF9	Q9HAQ2	790 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312	ERVK-5	Q9HDB9	667 aa		13.64	□□□□□ -0.23
DDR1-238	ENST00000446312		A0A1W2PQJ5	194 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	MYBL1	P10243	752 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	DAB2IP	Q5VWQ8	1189 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	PWWP2A	Q96N64	755 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	ELAC2	Q9BQ52	826 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	CD209	Q9NNX6	404 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	SLC40A1	Q9NP59	571 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	GDF3	Q9NR23	364 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	TBK1	Q9UHD2	729 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	XRCC5	P13010	732 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	CYP11B2	P19099	503 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	GALC	P54803	685 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	KIF2B	Q8N4N8	673 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	MYCT1	Q8N699	235 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	WDR66	Q8TBY9	1149 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	LUC7L	Q9NQ29	371 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	NAGPA	Q9UK23	515 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	STK38L	Q9Y2H1	464 aa		13.63	□□□□□ -0.23
DDR1-238	ENST00000446312	PRPH	P41219	470 aa		13.62	□□□□□ -0.23

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