RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	SCNN1B	P51168	640 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	OCRL	Q01968	901 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	ARHGAP36	Q6ZRI8	547 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	DDX46	Q7L014	1031 aa	Known RBP	4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	KRT26	Q7Z3Y9	468 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	OR2W6P	Q8NHA6	318 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	ORAI3	Q9BRQ5	295 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	IFT57	Q9NWB7	429 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	C11orf21	Q9P2W6	132 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	COQ6	Q9Y2Z9	468 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	TCRBV5S2	A0A599	114 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	SLC12A8	A0AV02	714 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	NPIPB8	E9PQR5	432 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141		M0R2C6	588 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	CKM	P06732	381 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	COL6A2	P12110	1019 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	KRT15	P19012	456 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	STAT3	P40763	770 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	ABHD18	Q0P651	414 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	FOXE3	Q13461	319 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	ZNF460	Q14592	562 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	HABP4	Q5JVS0	413 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	KCTD1	Q719H9	257 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	RALYL	Q86SE5	291 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	OSTM1	Q86WC4	334 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	PASD1	Q8IV76	773 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	CISD2	Q8N5K1	135 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	CHST14	Q8NCH0	376 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	TTLL11	Q8NHH1	800 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	TARS2	Q9BW92	718 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	BOC	Q9BWV1	1114 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	SEC61A2	Q9H9S3	476 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	ASH2L	Q9UBL3	628 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	ADAM29	Q9UKF5	820 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	ATP23	Q9Y6H3	246 aa		4.6	□□□□□ -1.67
VPS8-208	ENST00000441141	WDR33	Q9C0J8	1336 aa	Known RBP	4.6	□□□□□ -1.67
VPS8-208	ENST00000441141		A0A087X0B3	334 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	GSG1L2	A8MUP6	293 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141		H7C1D1	291 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	ZNF561-AS1	K7EIQ3	104 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	CBX4	O00257	560 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	SLC27A2	O14975	620 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	KPNA6	O60684	536 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	CLASP2	O75122	1294 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	GLRX3	O76003	335 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	LRG1	P02750	347 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	VIL1	P09327	827 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	KCNA6	P17658	529 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	EPHA5	P54756	1037 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	PURA	Q00577	322 aa	Known RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	TUSC3	Q13454	348 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	DHCR24	Q15392	516 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	ZNF174	Q15697	407 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	TMC5	Q6UXY8	1006 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	OVCH1	Q7RTY7	1134 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	C11orf74	Q86VG3	221 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	THNSL2	Q86YJ6	484 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	IFNL2	Q8IZJ0	200 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	LEO1	Q8WVC0	666 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	LMF1	Q96S06	567 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	B4GALT6	Q9UBX8	382 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	CBLC	Q9ULV8	474 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	SRPK3	Q9UPE1	567 aa		4.59	□□□□□ -1.67
VPS8-208	ENST00000441141	NKRF	O15226	690 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	CHGB	P05060	677 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	JAM2	P57087	298 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	SMN1	Q16637	294 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	NRN1L	Q496H8	165 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	MIIP	Q5JXC2	388 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	BTBD8	Q5XKL5	378 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	ABHD17C	Q6PCB6	329 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	RNF207	Q6ZRF8	634 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	PTRH1	Q86Y79	214 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	USP7	Q93009	1102 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	GNRHR2	Q96P88	292 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	ADO	Q96SZ5	270 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	BRINP2	Q9C0B6	783 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	CSRNP2	Q9H175	543 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	PCIF1	Q9H4Z3	704 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	MCM8	Q9UJA3	840 aa		4.58	□□□□□ -1.68
VPS8-208	ENST00000441141	PTPDC1	A2A3K4	754 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	FOXS1	O43638	330 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	ZEB2	O60315	1214 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	BRINP1	O60477	761 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	FBXO21	O94952	628 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	ZNF202	O95125	648 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	CNOT4	O95628	575 aa	Known RBP	4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	F2	P00734	622 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	MCM7	P33993	719 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	MECP2	P51608	486 aa	Known RBP	4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	INHBE	P58166	350 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	IRF9	Q00978	393 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	VASN	Q6EMK4	673 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141	TCTN3	Q6NUS6	607 aa		4.57	□□□□□ -1.68
VPS8-208	ENST00000441141		Q6ZUG5	572 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms