RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
VPS8-208ENST00000441141 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
VPS8-208ENST00000441141 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
VPS8-208ENST00000441141 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
VPS8-208ENST00000441141 FOXD1Q16676 465 aa17.25■□□□□ 0.35
VPS8-208ENST00000441141 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
VPS8-208ENST00000441141 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
VPS8-208ENST00000441141 MSH5O43196 834 aa16.24■□□□□ 0.19
VPS8-208ENST00000441141 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
VPS8-208ENST00000441141 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
VPS8-208ENST00000441141 ADRA2BP18089 450 aa16■□□□□ 0.15
VPS8-208ENST00000441141 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
VPS8-208ENST00000441141 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
VPS8-208ENST00000441141 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
VPS8-208ENST00000441141 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
VPS8-208ENST00000441141 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
VPS8-208ENST00000441141 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
VPS8-208ENST00000441141 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
VPS8-208ENST00000441141 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
VPS8-208ENST00000441141 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
VPS8-208ENST00000441141 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
VPS8-208ENST00000441141 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
VPS8-208ENST00000441141 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
VPS8-208ENST00000441141 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
VPS8-208ENST00000441141 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
VPS8-208ENST00000441141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS8-208ENST00000441141 KCNA4P22459 653 aa13.2□□□□□ -0.3
VPS8-208ENST00000441141 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
VPS8-208ENST00000441141 POTEHQ6S545 545 aa13.04□□□□□ -0.32
VPS8-208ENST00000441141 CAPN15O75808 1086 aa13.01□□□□□ -0.33
VPS8-208ENST00000441141 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
VPS8-208ENST00000441141 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
VPS8-208ENST00000441141 DSG3P32926 999 aa12.9□□□□□ -0.34
VPS8-208ENST00000441141 APLP2Q06481 763 aa12.88□□□□□ -0.35
VPS8-208ENST00000441141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
VPS8-208ENST00000441141 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
VPS8-208ENST00000441141 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
VPS8-208ENST00000441141 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
VPS8-208ENST00000441141 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
VPS8-208ENST00000441141 ABCB7O75027 752 aa12.65□□□□□ -0.38
VPS8-208ENST00000441141 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
VPS8-208ENST00000441141 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
VPS8-208ENST00000441141 POLA2Q14181 598 aa12.4□□□□□ -0.42
VPS8-208ENST00000441141 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
VPS8-208ENST00000441141 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
VPS8-208ENST00000441141 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
VPS8-208ENST00000441141 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
VPS8-208ENST00000441141 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
VPS8-208ENST00000441141 ZBTB22O15209 634 aa12.09□□□□□ -0.47
VPS8-208ENST00000441141 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
VPS8-208ENST00000441141 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
VPS8-208ENST00000441141 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
VPS8-208ENST00000441141 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
VPS8-208ENST00000441141 FBLN2P98095 1184 aa11.85□□□□□ -0.51
VPS8-208ENST00000441141 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
VPS8-208ENST00000441141 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
VPS8-208ENST00000441141 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
VPS8-208ENST00000441141 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
VPS8-208ENST00000441141 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
VPS8-208ENST00000441141 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
VPS8-208ENST00000441141 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS8-208ENST00000441141 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
VPS8-208ENST00000441141 HAX1O00165 279 aa11.63□□□□□ -0.55
VPS8-208ENST00000441141 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
VPS8-208ENST00000441141 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
VPS8-208ENST00000441141 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
VPS8-208ENST00000441141 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
VPS8-208ENST00000441141 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
VPS8-208ENST00000441141 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
VPS8-208ENST00000441141 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS8-208ENST00000441141 PRR29P0C7W0 189 aa11.38□□□□□ -0.59
VPS8-208ENST00000441141 EVX2Q03828 476 aa11.38□□□□□ -0.59
VPS8-208ENST00000441141 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
VPS8-208ENST00000441141 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
VPS8-208ENST00000441141 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
VPS8-208ENST00000441141 PLSCR2Q9NRY7 297 aa11.25□□□□□ -0.61
VPS8-208ENST00000441141 GABBR2O75899 941 aa11.18□□□□□ -0.62
VPS8-208ENST00000441141 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
VPS8-208ENST00000441141 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
VPS8-208ENST00000441141 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
VPS8-208ENST00000441141 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
VPS8-208ENST00000441141 CLCN6P51797 869 aa11.05□□□□□ -0.64
VPS8-208ENST00000441141 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
VPS8-208ENST00000441141 LHX8Q68G74 356 aa10.98□□□□□ -0.65
VPS8-208ENST00000441141 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
VPS8-208ENST00000441141 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
VPS8-208ENST00000441141 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
VPS8-208ENST00000441141 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
VPS8-208ENST00000441141 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
VPS8-208ENST00000441141 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
VPS8-208ENST00000441141 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
VPS8-208ENST00000441141 GALR2O43603 387 aaPredicted RBP10.79□□□□□ -0.68
VPS8-208ENST00000441141 PROM2Q8N271 834 aa10.79□□□□□ -0.68
VPS8-208ENST00000441141 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
VPS8-208ENST00000441141 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
VPS8-208ENST00000441141 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
VPS8-208ENST00000441141 MIER1Q8N108 512 aa10.65□□□□□ -0.7
VPS8-208ENST00000441141 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
VPS8-208ENST00000441141 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
VPS8-208ENST00000441141 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms