RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 PLA2G4DQ86XP0 818 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 NPLOC4Q8TAT6 608 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 INPP4AQ96PE3 977 aaPredicted RBP12.24□□□□□ -0.45
LMO3-207ENST00000439600 RAB34Q9BZG1 259 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 TBC1D22BQ9NU19 505 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 TCEAL9Q9UHQ7 104 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 TRIM17Q9Y577 477 aa12.24□□□□□ -0.45
LMO3-207ENST00000439600 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 GOLGA6L22H0YM25 854 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
LMO3-207ENST00000439600 ADCY3O60266 1144 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 PPP6R2O75170 966 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
LMO3-207ENST00000439600 NASPP49321 788 aaPredicted RBP12.23□□□□□ -0.45
LMO3-207ENST00000439600 RELBQ01201 579 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 DNM1Q05193 864 aaKnown RBP12.23□□□□□ -0.45
LMO3-207ENST00000439600 ACVR2BQ13705 512 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 NEDD9Q14511 834 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 TTLL4Q14679 1199 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 STK38Q15208 465 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 CALCRLQ16602 461 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 TMEM266Q2M3C6 531 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 DTHD1Q6ZMT9 781 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 SCFD2Q8WU76 684 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
LMO3-207ENST00000439600 FERMT2Q96AC1 680 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 RIT2Q99578 217 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 SENP7Q9BQF6 1050 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 ZNF577Q9BSK1 485 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 KCNH7Q9NS40 1196 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 RCOR1Q9UKL0 485 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 PCDHA12Q9UN75 941 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 GABRQQ9UN88 632 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 PCDHB6Q9Y5E3 794 aa12.23□□□□□ -0.45
LMO3-207ENST00000439600 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
LMO3-207ENST00000439600 FAM86B1E9PN63 330 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 H3BRB1 525 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 FAM86B2P0C5J1 330 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 ITGB5P18084 799 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 ZNF211Q13398 564 aaPredicted RBP12.22□□□□□ -0.45
LMO3-207ENST00000439600 PDIA5Q14554 519 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 C16orf46Q6P387 395 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 SEPT14Q6ZU15 432 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 OTOP1Q7RTM1 612 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 SPATA32Q96LK8 384 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 FGD4Q96M96 766 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
LMO3-207ENST00000439600 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 MRVI1Q9Y6F6 885 aa12.22□□□□□ -0.45
LMO3-207ENST00000439600 IGLV3-22A0A075B6J6 115 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 RBM47A0AV96 593 aaKnown RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 SERTM1A2A2V5 107 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 IPO5O00410 1097 aaKnown RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 SPTLC2O15270 562 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 TDP2O95551 362 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 SNAI1O95863 264 aaPredicted RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 HMGCRP04035 888 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 OR52Z1P0C646 297 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 NPR3P17342 541 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 CTU1Q7Z7A3 348 aaKnown RBP12.21□□□□□ -0.45
LMO3-207ENST00000439600 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 IL31RAQ8NI17 732 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 HPS1Q92902 700 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 MTMR9Q96QG7 549 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 Q9Y3F1 56 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
LMO3-207ENST00000439600 ASTN1O14525 1302 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 NFASCO94856 1347 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 MSH4O15457 936 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 EDIL3O43854 480 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 GAS7O60861 476 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 FAM13AO94988 1023 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 UPP2O95045 317 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 IGHA2P01877 340 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
LMO3-207ENST00000439600 PTMSP20962 102 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 GRK4P32298 578 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 TXKP42681 527 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 MARSP56192 900 aaKnown RBP12.2□□□□□ -0.46
LMO3-207ENST00000439600 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 TBCELQ5QJ74 424 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 CAPN12Q6ZSI9 719 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 CYP2W1Q8TAV3 490 aa12.2□□□□□ -0.46
LMO3-207ENST00000439600 SLC5A5Q92911 643 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms