RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 SLC5A5Q92911 643 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 TNPO1Q92973 898 aaKnown RBP10□□□□□ -0.81
LINC00963-204ENST00000427778 TNFRSF25Q93038 417 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 ZSCAN31Q96LW9 406 aaPredicted RBP10□□□□□ -0.81
LINC00963-204ENST00000427778 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
LINC00963-204ENST00000427778 AZI2Q9H6S1 392 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 SH2B1Q9NRF2 756 aaPredicted RBP10□□□□□ -0.81
LINC00963-204ENST00000427778 SETD4Q9NVD3 440 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 KCNJ14Q9UNX9 436 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 COL1A2P08123 1366 aa10□□□□□ -0.81
LINC00963-204ENST00000427778 FAM86C2PA6NEL3 165 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 TK2O00142 265 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 MSH4O15457 936 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 NBNO60934 754 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 GCFC2P16383 781 aaKnown RBP9.99□□□□□ -0.81
LINC00963-204ENST00000427778 MRE11P49959 708 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 STAT5BP51692 787 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 RAB30Q15771 203 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 GRIK4Q16099 956 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 FAM26DQ5JW98 314 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 ZNF618Q5T7W0 954 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 FAM160B1Q5W0V3 765 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 PPP4R3AQ6IN85 833 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 CNKSR3Q6P9H4 555 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 B3GNT9Q6UX72 402 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 OTOP2Q7RTS6 562 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 CCDC60Q8IWA6 550 aaPredicted RBP9.99□□□□□ -0.81
LINC00963-204ENST00000427778 RDM1Q8NG50 284 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 ETNPPLQ8TBG4 499 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 ATP8B4Q8TF62 1192 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
LINC00963-204ENST00000427778 C11orf16Q9NQ32 467 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 TUBE1Q9UJT0 475 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 MAFBQ9Y5Q3 323 aaPredicted RBP9.99□□□□□ -0.81
LINC00963-204ENST00000427778 IGSF9BQ9UPX0 1349 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
LINC00963-204ENST00000427778 CCDC194A0A1B0GVG4 234 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 WDR64B1ANS9 1081 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 JAK2O60674 1132 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 GPR37L1O60883 481 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 EFCAB14O75071 495 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 PSMD10O75832 226 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 TDP2O95551 362 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 MMP1P03956 469 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 INSRRP14616 1297 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 MARK3P27448 753 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 SFNP31947 248 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 THPOP40225 353 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 PLCB4Q15147 1175 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 SKIV2LQ15477 1246 aaKnown RBP9.98□□□□□ -0.81
LINC00963-204ENST00000427778 INF2Q27J81 1249 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 MIS18BP1Q6P0N0 1132 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 DEFB128Q7Z7B8 93 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 PHOSPHO2Q8TCD6 241 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 RNF25Q96BH1 459 aaPredicted RBP9.98□□□□□ -0.81
LINC00963-204ENST00000427778 TBC1D32Q96NH3 1257 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 SLC9A7Q96T83 725 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
LINC00963-204ENST00000427778 KCNMB3Q9NPA1 279 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 GJB4Q9NTQ9 266 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 TCEAL9Q9UHQ7 104 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 MSRAQ9UJ68 235 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 PCDHA10Q9Y5I2 948 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 SLC4A7Q9Y6M7 1214 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 TTC3P53804 2025 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 ARID2Q68CP9 1835 aa9.98□□□□□ -0.81
LINC00963-204ENST00000427778 WDFY4Q6ZS81 3184 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 ABHD14A-ACY1A0A1B0GW23 586 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 TBX3O15119 743 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 HBP1O60381 514 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 GAS7O60861 476 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 PSAPP07602 524 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
LINC00963-204ENST00000427778 KRT2P35908 639 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 JAK3P52333 1124 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 HMGN5P82970 282 aaKnown RBP9.97□□□□□ -0.81
LINC00963-204ENST00000427778 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 PDXDC2PQ6P474 469 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 FAM43BQ6ZT52 329 aaPredicted RBP9.97□□□□□ -0.81
LINC00963-204ENST00000427778 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 OXER1Q8TDS5 423 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
LINC00963-204ENST00000427778 FAM167AQ96KS9 214 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 FAM20AQ96MK3 541 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 TEKT3Q9BXF9 490 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 NKX2-4Q9H2Z4 354 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 SLC28A3Q9HAS3 691 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 BRMS1Q9HCU9 246 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 ZNF302Q9NR11 478 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 DDX25Q9UHL0 483 aaKnown RBP9.97□□□□□ -0.81
LINC00963-204ENST00000427778 PCDHA2Q9Y5H9 948 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 PCDHA11Q9Y5I1 949 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 BRWD1Q9NSI6 2320 aa9.97□□□□□ -0.81
LINC00963-204ENST00000427778 SMIM35A0A1B0GVV1 85 aa9.96□□□□□ -0.82
LINC00963-204ENST00000427778 DDX39AO00148 427 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms