RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 ZBED2Q9BTP6 218 aa20.8■□□□□ 0.92
MSH5-207ENST00000425703 CELF4Q9BZC1 486 aaKnown RBP20.8■□□□□ 0.92
MSH5-207ENST00000425703 VAV3Q9UKW4 847 aa20.8■□□□□ 0.92
MSH5-207ENST00000425703 COL6A3P12111 3177 aa20.8■□□□□ 0.92
MSH5-207ENST00000425703 FOSL2P15408 326 aa20.79■□□□□ 0.92
MSH5-207ENST00000425703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.928e-8■□□□□ 10.5
MSH5-207ENST00000425703 FBXO18Q8NFZ0 1043 aa20.79■□□□□ 0.92
MSH5-207ENST00000425703 HAS1Q92839 578 aa20.79■□□□□ 0.92
MSH5-207ENST00000425703 FAM205CA6NFA0 338 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
MSH5-207ENST00000425703 MCM2P49736 904 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 UGCGQ16739 394 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 XKR3Q5GH77 459 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 TOP1MTQ969P6 601 aa20.78■□□□□ 0.92
MSH5-207ENST00000425703 GAS2L1Q99501 681 aaPredicted RBP20.78■□□□□ 0.92
MSH5-207ENST00000425703 NIFKQ9BYG3 293 aaKnown RBP20.78■□□□□ 0.92
MSH5-207ENST00000425703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.77■□□□□ 0.92
MSH5-207ENST00000425703 MARCH6O60337 910 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 DKC1O60832 514 aaKnown RBP eCLIP20.77■□□□□ 0.92
MSH5-207ENST00000425703 PSMC5P62195 406 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 HTRA4P83105 476 aaPredicted RBP20.77■□□□□ 0.92
MSH5-207ENST00000425703 TAP1Q03518 808 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 TARBP2Q15633 366 aaKnown RBP20.77■□□□□ 0.92
MSH5-207ENST00000425703 MYOCDQ8IZQ8 938 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 FAM184AQ8NB25 1140 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 FTHL17Q9BXU8 183 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 FOXP1Q9H334 677 aaPredicted RBP20.77■□□□□ 0.92
MSH5-207ENST00000425703 PRDM12Q9H4Q4 367 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 INSL6Q9Y581 213 aa20.77■□□□□ 0.92
MSH5-207ENST00000425703 TMOD1P28289 359 aa20.76■□□□□ 0.91
MSH5-207ENST00000425703 TMEM62Q0P6H9 643 aa20.76■□□□□ 0.91
MSH5-207ENST00000425703 TRMT1LQ7Z2T5 733 aaKnown RBP20.76■□□□□ 0.91
MSH5-207ENST00000425703 TMCO2Q7Z6W1 182 aaPredicted RBP20.76■□□□□ 0.91
MSH5-207ENST00000425703 METTL13Q8N6R0 699 aa20.76■□□□□ 0.91
MSH5-207ENST00000425703 LINC01465Q8N7H1 131 aa20.76■□□□□ 0.91
MSH5-207ENST00000425703 AGO3Q9H9G7 860 aaKnown RBP20.76■□□□□ 0.91
MSH5-207ENST00000425703 KIF3AQ9Y496 699 aa20.76■□□□□ 0.91
MSH5-207ENST00000425703 EML1O00423 815 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 STBD1O95210 358 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 P4HBP07237 508 aaKnown RBP20.75■□□□□ 0.91
MSH5-207ENST00000425703 CD52P31358 61 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 QARSP47897 775 aaKnown RBP20.75■□□□□ 0.91
MSH5-207ENST00000425703 FOSBP53539 338 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 SPIRE1Q08AE8 756 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 ORC2Q13416 577 aaPredicted RBP20.75■□□□□ 0.91
MSH5-207ENST00000425703 EPHA7Q15375 998 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 ODR4Q5SWX8 454 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 MAFAQ8NHW3 353 aaPredicted RBP20.75■□□□□ 0.91
MSH5-207ENST00000425703 MAP7D2Q96T17 732 aa20.75■□□□□ 0.91
MSH5-207ENST00000425703 MYH9P35579 1960 aaKnown RBP20.75■□□□□ 0.91
MSH5-207ENST00000425703 ENPP3O14638 875 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 NEMFO60524 1076 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 CRYBB1P53674 252 aaPredicted RBP20.74■□□□□ 0.91
MSH5-207ENST00000425703 GUCY1B3Q02153 619 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 TBC1D8BQ0IIM8 1120 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 PAK2Q13177 524 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 CALCRLQ16602 461 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 EFCAB12Q6NXP0 572 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 BANK1Q8NDB2 785 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 SP7Q8TDD2 431 aaPredicted RBP20.74■□□□□ 0.91
MSH5-207ENST00000425703 GBF1Q92538 1859 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 TMX3Q96JJ7 454 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 PADI3Q9ULW8 664 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 PPME1Q9Y570 386 aa20.74■□□□□ 0.91
MSH5-207ENST00000425703 CHD7Q9P2D1 2997 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 MICAL3Q7RTP6 2002 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 LCHNA4D1U4 455 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 GPR32O75388 356 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 ARHGEF15O94989 841 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 CDC42EP1Q00587 391 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 MTMR9Q96QG7 549 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 CEP89Q96ST8 783 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 SEPT9Q9UHD8 586 aaPredicted RBP20.73■□□□□ 0.91
MSH5-207ENST00000425703 PCDHA12Q9UN75 941 aa20.73■□□□□ 0.91
MSH5-207ENST00000425703 IGKV6-21A0A0C4DH24 114 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 RPS6KA5O75582 802 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 POU3F3P20264 500 aaPredicted RBP20.72■□□□□ 0.91
MSH5-207ENST00000425703 TRAPPC10P48553 1259 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 ADGRE1Q14246 886 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 FAM117BQ6P1L5 589 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 ANO5Q75V66 913 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 NOSTRINQ8IVI9 506 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 C4orf19Q8IY42 314 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 TGS1Q96RS0 853 aaKnown RBP20.72■□□□□ 0.91
MSH5-207ENST00000425703 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
MSH5-207ENST00000425703 TSPYL2Q9H2G4 693 aaPredicted RBP20.72■□□□□ 0.91
MSH5-207ENST00000425703 PTPRSQ13332 1948 aa20.72■□□□□ 0.91
MSH5-207ENST00000425703 SIP14410 1827 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 COL4A6Q14031 1691 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 LINC01553A4QN01 128 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 GPR182O15218 404 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 VTNP04004 478 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 U2AF2P26368 475 aaKnown RBP eCLIP20.71■□□□□ 0.912e-11■■■■■ 47.8
MSH5-207ENST00000425703 CLCN3P51790 818 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 ERVK-21P61565 698 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 KIZQ2M2Z5 673 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 EXOC8Q8IYI6 725 aa20.71■□□□□ 0.91
MSH5-207ENST00000425703 TMEM40Q8WWA1 233 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms