RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 FNDC1Q4ZHG4 1894 aaPredicted RBP19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 E7EWF7 191 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 ATG7O95352 703 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 KIF5BP33176 963 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 NBL1P41271 181 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 ODR4Q5SWX8 454 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 ASCL5Q7RTU5 278 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 RALYLQ86SE5 291 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 UBALD2Q8IYN6 164 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 CTCFLQ8NI51 663 aaPredicted RBP19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 ADAM2Q99965 735 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 PUF60Q9UHX1 559 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 NOC2LQ9Y3T9 749 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 NR2E1Q9Y466 385 aa19.16■□□□□ 0.66
CHCHD3-202ENST00000423635 RPS6KA5O75582 802 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 DDAH1O94760 285 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 LAG3P18627 525 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 KLRC1P26715 233 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 SLC26A2P50443 739 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 ANTXR2P58335 489 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 ZBTB33Q86T24 672 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 SRBD1Q8N5C6 995 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 KREMEN2Q8NCW0 462 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 ELAC1Q9H777 363 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 CDHR5Q9HBB8 845 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 NGRNQ9NPE2 291 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 KCNH7Q9NS40 1196 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 ST3GAL5Q9UNP4 418 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 NFASCO94856 1347 aa19.15■□□□□ 0.66
CHCHD3-202ENST00000423635 SPTBN4Q9H254 2564 aa19.14■□□□□ 0.66
CHCHD3-202ENST00000423635 DENND3A2RUS2 1198 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 GPR182O15218 404 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 GNAQP50148 359 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 ACTR2P61160 394 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 PTH1RQ03431 593 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 KIAA0319LQ8IZA0 1049 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 ZNF654Q8IZM8 581 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 MXRA8Q9BRK3 442 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 TMEM161AQ9NX61 479 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 HCSTQ9UBK5 93 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 SORCS3Q9UPU3 1222 aa19.14■□□□□ 0.65
CHCHD3-202ENST00000423635 RIF1Q5UIP0 2472 aaKnown RBP19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 IGKV6D-21A0A0A0MT36 114 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 PRR23AA6NEV1 266 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 HIDE1A8MVS5 230 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 IGHDP01880 384 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 APOBRQ0VD83 1088 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 MTMR3Q13615 1198 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 PLPP4Q5VZY2 271 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 MB21D2Q8IYB1 491 aaPredicted RBP19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 TCF25Q9BQ70 676 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 SDF4Q9BRK5 362 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 MTA3Q9BTC8 594 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 ATP6V0A4Q9HBG4 840 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 LY9Q9HBG7 655 aa19.13■□□□□ 0.65
CHCHD3-202ENST00000423635 MYO10Q9HD67 2058 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 HBP1O60381 514 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 PLEKHA8P1O95397 391 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 BRD1O95696 1058 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 IBSPP21815 317 aaPredicted RBP19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 UBE2SQ16763 222 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 TMEM105Q8N8V8 129 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 CYP2W1Q8TAV3 490 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 CASP10Q92851 521 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 NECTIN4Q96NY8 510 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 MYL10Q9BUA6 226 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 APOL5Q9BWW9 433 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 ADAM7Q9H2U9 754 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 GINS2Q9Y248 185 aa19.12■□□□□ 0.65
CHCHD3-202ENST00000423635 FGFR1P11362 822 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 PDE4AP27815 886 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 ITIH3Q06033 890 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 DSC3Q14574 896 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 LLGL2Q6P1M3 1020 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 LRRC55Q6ZSA7 311 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 TMTC2Q8N394 836 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 TMEM117Q9H0C3 514 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 ENTPD7Q9NQZ7 604 aa19.11■□□□□ 0.65
CHCHD3-202ENST00000423635 VPS13AQ96RL7 3174 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 FAM186AA6NE01 2351 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 DCHS1Q96JQ0 3298 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 C2CD4DB7Z1M9 353 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 ARP10275 920 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 SP100P23497 879 aaPredicted RBP19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 CRYBB1P53674 252 aaPredicted RBP19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 KRT17Q04695 432 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 ITGB3BPQ13352 177 aaPredicted RBP19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 CES5AQ6NT32 575 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 KCNT2Q6UVM3 1135 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 ERMP1Q7Z2K6 904 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 MRPL43Q8N983 215 aaKnown RBP19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 RUFY2Q8WXA3 655 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 CASD1Q96PB1 797 aa19.1■□□□□ 0.65
CHCHD3-202ENST00000423635 POMKQ9H5K3 350 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms