RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 ATP2C2O75185 946 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 NOVP48745 357 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 CORO7P57737 925 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
LIMK1-202ENST00000418310 DYDC2Q96IM9 177 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 TRIM51Q9BSJ1 452 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
LIMK1-202ENST00000418310 TISP43B9A030 160 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 TTI1O43156 1089 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
LIMK1-202ENST00000418310 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
LIMK1-202ENST00000418310 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-202ENST00000418310 TSKSQ9UJT2 592 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 ASTN1O14525 1302 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 NR1D1P20393 614 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 MAGEA9P43362 315 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 NT5C2P49902 561 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 BANK1Q8NDB2 785 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 AIPL1Q9NZN9 384 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 PCDHGC5Q9Y5F6 944 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 CLRN2A0PK11 232 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 CALUO43852 315 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-202ENST00000418310 H2AFZP0C0S5 128 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 ABCB5Q2M3G0 1257 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-202ENST00000418310 H2AFVQ71UI9 128 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SIAH1Q8IUQ4 282 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 GDF3Q9NR23 364 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
LIMK1-202ENST00000418310 E7EVH7 732 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 DDX3XO00571 662 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■□□□ 13.9
LIMK1-202ENST00000418310 FLOT1O75955 427 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 TMOD1P28289 359 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 CTNNA1P35221 906 aaKnown RBP12.97□□□□□ -0.33
LIMK1-202ENST00000418310 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
LIMK1-202ENST00000418310 FAM186BQ8IYM0 893 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 PIK3R5Q8WYR1 880 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SLC35C1Q96A29 364 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 TAS2R14Q9NYV8 317 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 FAM198AQ9UFP1 575 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 EVI5O60447 810 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 GALCP54803 685 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SYDE2Q5VT97 1194 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SYT2Q8N9I0 419 aaPredicted RBP12.97□□□□□ -0.33
LIMK1-202ENST00000418310 LENG9Q96B70 501 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 H0YHG0 523 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 FGGP02679 453 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 RPA1P27694 616 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 USP11P51784 963 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SP8Q8IXZ3 490 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 SYCP3Q8IZU3 236 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
LIMK1-202ENST00000418310 ITIH3Q06033 890 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
LIMK1-202ENST00000418310 EPHA7Q15375 998 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 CBWD6Q4V339 395 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 CBWD3Q5JTY5 395 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 CBWD5Q5RIA9 395 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 ZNF572Q7Z3I7 529 aaPredicted RBP12.96□□□□□ -0.33
LIMK1-202ENST00000418310 TPCN2Q8NHX9 752 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 FBXL5Q9UKA1 691 aa12.96□□□□□ -0.33
LIMK1-202ENST00000418310 PGRMC1O00264 195 aaKnown RBP12.96□□□□□ -0.34
LIMK1-202ENST00000418310 HSD17B3P37058 310 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 DRAP1Q14919 205 aaPredicted RBP12.96□□□□□ -0.34
LIMK1-202ENST00000418310 EDRF1Q3B7T1 1238 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 HYIQ5T013 277 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 RINT1Q6NUQ1 792 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 TADA2BQ86TJ2 420 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 VPS36Q86VN1 386 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 IQCKQ8N0W5 287 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 ACER1Q8TDN7 264 aa12.96□□□□□ -0.34
LIMK1-202ENST00000418310 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms