RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 NPHP4O75161 1426 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-209ENST00000415046 TNFRSF1AP19438 455 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 GPR85P60893 370 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
PTPRK-209ENST00000415046 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 NSMFQ6X4W1 530 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
PTPRK-209ENST00000415046 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRK-209ENST00000415046 CLEC4DQ8WXI8 215 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 ZNF669Q96BR6 464 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-209ENST00000415046 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 RIMS2Q9UQ26 1411 aa6.29□□□□□ -1.4
PTPRK-209ENST00000415046 CCDC144AA2RUR9 1427 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 TRAV20A0A0B4J274 112 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 EPHB4P54760 987 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 GRIN1Q05586 938 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 SPIRE1Q08AE8 756 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 TUSC3Q13454 348 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 YOD1Q5VVQ6 348 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-209ENST00000415046 PCGF6Q9BYE7 350 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 SLC52A1Q9NWF4 448 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 NUB1Q9Y5A7 615 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 TMEM2Q9UHN6 1383 aa6.28□□□□□ -1.4
PTPRK-209ENST00000415046 ZFYVE9O95405 1425 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 CHGBP05060 677 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 GNAT1P11488 350 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 FAHP16930 419 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 IFRD2Q12894 506 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-209ENST00000415046 PAN2Q504Q3 1202 aaKnown RBP6.27□□□□□ -1.41
PTPRK-209ENST00000415046 KBTBD2Q8IY47 623 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 IGDCC4Q8TDY8 1250 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 DVL3Q92997 716 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-209ENST00000415046 BARX1Q9HBU1 254 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-209ENST00000415046 ADAM29Q9UKF5 820 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 MSRB2Q9Y3D2 182 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 TELO2Q9Y4R8 837 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 EID1Q9Y6B2 187 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 MED14O60244 1454 aa6.27□□□□□ -1.41
PTPRK-209ENST00000415046 LTBP4Q8N2S1 1624 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 BLACEA4D250 179 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 NKRFO15226 690 aaKnown RBP eCLIP6.26□□□□□ -1.41
PTPRK-209ENST00000415046 MATN3O15232 486 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 KLHL18O94889 574 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 LTFP02788 710 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 SOD2P04179 222 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 COL6A2P12110 1019 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 EPHA5P54756 1037 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 NFATC3Q12968 1075 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 SMAD2Q15796 467 aaKnown RBP6.26□□□□□ -1.41
PTPRK-209ENST00000415046 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
PTPRK-209ENST00000415046 RBM12BQ8IXT5 1001 aaKnown RBP6.26□□□□□ -1.41
PTPRK-209ENST00000415046 CHST13Q8NET6 341 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 TMPRSS5Q9H3S3 457 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 ST6GALNAC2Q9UJ37 374 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 DIP2AQ14689 1571 aa6.26□□□□□ -1.41
PTPRK-209ENST00000415046 ZNF335Q9H4Z2 1342 aaPredicted RBP6.25□□□□□ -1.41
PTPRK-209ENST00000415046 LAMC1P11047 1609 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 FAM47E-STBD1D6RA91 191 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 GPR42O15529 346 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 KNG1P01042 644 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 PPP2CBP62714 309 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 PPP2CAP67775 309 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 ICAM4Q14773 271 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 SKIDA1Q1XH10 827 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 PHF19Q5T6S3 580 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 CD276Q5ZPR3 534 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 ARHGEF18Q6ZSZ5 1173 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 NUDT10Q8NFP7 164 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 NUDT11Q96G61 164 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 KCNJ15Q99712 375 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 TRIM55Q9BYV6 548 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 DSEQ9UL01 958 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 ANKRD30BQ9BXX2 1392 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 SETBP1Q9Y6X0 1596 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 XRN1Q8IZH2 1706 aaKnown RBP6.25□□□□□ -1.41
PTPRK-209ENST00000415046 SPATA31E1Q6ZUB1 1445 aa6.25□□□□□ -1.41
PTPRK-209ENST00000415046 NWD1Q149M9 1564 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 DHX57Q6P158 1386 aaKnown RBP6.24□□□□□ -1.41
PTPRK-209ENST00000415046 PLEKHG1Q9ULL1 1385 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 NPEPPSL1A6NEC2 478 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 CKMP06732 381 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 RBM25P49756 843 aaKnown RBP6.24□□□□□ -1.41
PTPRK-209ENST00000415046 KCTD1Q719H9 257 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 CIR1Q86X95 450 aaPredicted RBP6.24□□□□□ -1.41
PTPRK-209ENST00000415046 ALG1Q9BT22 464 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 MEGF9Q9H1U4 602 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 IPPKQ9H8X2 491 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 CD248Q9HCU0 757 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 ZFP69BQ9UJL9 534 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 NALCNQ8IZF0 1738 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 ALKQ9UM73 1620 aa6.24□□□□□ -1.41
PTPRK-209ENST00000415046 RGPD8O14715 1765 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms