RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 INTS8Q75QN2 995 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 CCDC186Q7Z3E2 898 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 OPTNQ96CV9 577 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 NFE2L3Q9Y4A8 694 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 TNS2Q63HR2 1409 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8QA0A0J9YX86 632 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8OA6NCC3 632 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 FAM196BA6NMK8 535 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 BTBD18B2RXH4 712 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8NF8WBI6 632 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SLC4A1P02730 911 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 RFC5P40937 340 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ARL4DP49703 201 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 MAP4K1Q92918 833 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SH3BP1Q9Y3L3 701 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 WDR19Q8NEZ3 1342 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 TLDC2A0PJX2 215 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 MYO1FO00160 1098 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 FKTNO75072 461 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 CYP2D6P10635 497 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ERCC3P19447 782 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 IRX5P78411 483 aaPredicted RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 PLD1Q13393 1074 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 PREPLQ4J6C6 727 aaPredicted RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ARL6IP4Q66PJ3 421 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 KRBA2Q6ZNG9 492 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 DHX38Q92620 1227 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 MRRFQ96E11 262 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 PCDHA10Q9Y5I2 948 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 KIAA0391O15091 583 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ARHGAP6O43182 974 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 CD58P19256 250 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SOX5P35711 763 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 MXI1P50539 228 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SCRN1Q12765 414 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 PADI6Q6TGC4 694 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 DCP1BQ8IZD4 617 aaKnown RBP8.58□□□□□ -1.04
USP47-203ENST00000399455 ENGASEQ8NFI3 743 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 STAMQ92783 540 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 OSBP2Q969R2 916 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 EPSTI1Q96J88 318 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ZSWIM5Q9P217 1185 aa8.58□□□□□ -1.04
USP47-203ENST00000399455 ZNF853P0CG23 659 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CYP27A1Q02318 531 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 KAZNQ674X7 775 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 TRIM17Q9Y577 477 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ADGRB2O60241 1585 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 FLT1P17948 1338 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 DEFB115Q30KQ5 88 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 TMTC3Q6ZXV5 915 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ZNF467Q7Z7K2 595 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP47-203ENST00000399455 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CD4P01730 458 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ADCY8P40145 1251 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 GTF2H3Q13889 308 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ANKRD13CQ8N6S4 541 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ATRIPQ8WXE1 791 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 MTA3Q9BTC8 594 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 MAGED2Q9UNF1 606 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CTSHP09668 335 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CCHCR1Q8TD31 782 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 CNOT6LQ96LI5 555 aaKnown RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 LSG1Q9H089 658 aaKnown RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 TMEM39AQ9NV64 488 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ERAP1Q9NZ08 941 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 FAN1Q9Y2M0 1017 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 SLC26A4O43511 780 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ATF2P15336 505 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 IFNAR1P17181 557 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 USP11P51784 963 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ITPK1Q13572 414 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 PFKFB3Q16875 520 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 TTC23LQ6PF05 361 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP47-203ENST00000399455 ORC4O43929 436 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 PMLP29590 882 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 ZNF658Q5TYW1 1059 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 SRRM1Q8IYB3 904 aaKnown RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 TBC1D19Q8N5T2 526 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 FHDC1Q9C0D6 1143 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 UBE2TQ9NPD8 197 aaPredicted RBP8.57□□□□□ -1.04
USP47-203ENST00000399455 NYAP2Q9P242 653 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 STAP1Q9ULZ2 295 aa8.57□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8SH3BPF8 625 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 KRT1P04264 644 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 CTAGE3PQ8IX95 158 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms