RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 CTAGE1Q96RT6 745 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 RNF26Q9BY78 433 aaPredicted RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 FTOQ9C0B1 505 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 CXXC1Q9P0U4 656 aaPredicted RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 ZNF215Q9UL58 517 aaPredicted RBP13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
SMIM11A-201ENST00000399292 CHD9Q3L8U1 2897 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 C17orf102A2RUQ5 167 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 GNAT1P11488 350 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 CKBP12277 381 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ACTN1P12814 892 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 SELPP16109 830 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ZNF76P36508 570 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ARID5BQ14865 1188 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 JAKMIP3Q5VZ66 844 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 NPAS3Q8IXF0 933 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ARMC2Q8NEN0 867 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 CYP2W1Q8TAV3 490 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 VWCEQ96DN2 955 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 KCNH7Q9NS40 1196 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 STK17AQ9UEE5 414 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 STXBP5LQ9Y2K9 1186 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
SMIM11A-201ENST00000399292 ZBBXA8MT70 800 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 GRXCR1A8MXD5 290 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 CPLX1O14810 134 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 SMIM10L2AP0DMW4 78 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 SMIM10L2BP0DMW5 78 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 TCF7P36402 384 aaPredicted RBP13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 SREBF1P36956 1147 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 ANAPC15P60006 121 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 CPLX2Q6PUV4 134 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 LRRC8DQ7L1W4 858 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 ATP6V0A1Q93050 837 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
SMIM11A-201ENST00000399292 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 MEIS1O00470 390 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 ARP10275 920 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 RBL2Q08999 1139 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 STK3Q13188 491 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 NR5A1Q13285 461 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 REXO1Q8N1G1 1221 aaKnown RBP13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 GLG1Q92896 1179 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 GUCD1Q96NT3 240 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 PBX4Q9BYU1 374 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 SMARCAD1Q9H4L7 1026 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 SH3GLB2Q9NR46 395 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 SLC9A2Q9UBY0 812 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
SMIM11A-201ENST00000399292 TREHO43280 583 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 CYP3A4P08684 503 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 HOXC8P31273 242 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 THPOP40225 353 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 RAB30Q15771 203 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 NIPA1Q7RTP0 329 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 TRIM50Q86XT4 487 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 AGO4Q9HCK5 861 aaKnown RBP13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 SETD4Q9NVD3 440 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 ERAP1Q9NZ08 941 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 NFASCO94856 1347 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
SMIM11A-201ENST00000399292 RSPH10B2B2RC85 870 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 DEXIO95424 95 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 RSPH10BP0C881 870 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 NLRP5P59047 1200 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 GPNMBQ14956 572 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 ANKRD1Q15327 319 aa13.38□□□□□ -0.27
SMIM11A-201ENST00000399292 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms