RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 RIOX1Q9H6W3 641 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 ENAMQ9NRM1 1142 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 ZNF214Q9UL59 606 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 FAM184BQ9ULE4 1060 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PLAAQ9Y263 795 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PCDHAC2Q9Y5I4 1007 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 RPS6KL1Q9Y6S9 549 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PHLPP2Q6ZVD8 1323 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SCN10AQ9Y5Y9 1956 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 FSD2A1L4K1 749 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TRIM75PA6NK02 468 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TGFBR3LH3BV60 316 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 NDUFB10O96000 172 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PARP1P09874 1014 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 FAM153BP0C7A2 387 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 COL6A1P12109 1028 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 ICAM3P32942 547 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SLC1A4P43007 532 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MCM2P49736 904 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 HSD17B4P51659 736 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 GJA9P57773 515 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CAP1Q01518 475 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TFAP4Q01664 338 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TRIM32Q13049 653 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MTMR1Q13613 665 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 BRD3Q15059 726 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SEC23AQ15436 765 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TTC39BQ5VTQ0 682 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 XKR5Q6UX68 686 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MIGA2Q7L4E1 593 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 NECAB2Q7Z6G3 386 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 LSRQ86X29 649 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CCDC116Q8IYX3 515 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 RDM1Q8NG50 284 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 WASF1Q92558 559 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 WNT2BQ93097 391 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MFSD3Q96ES6 412 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 DDX20Q9UHI6 824 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SQORQ9Y6N5 450 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MORC2Q9Y6X9 1032 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 A0A1W2PP55 124 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MPHOSPH10O00566 681 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 ENC1O14682 589 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 HRO43593 1189 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 FLOT1O75955 427 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TBC1D8O95759 1140 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 APPP05067 770 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PDHBP11177 359 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CPT1AP50416 773 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SLC26A2P50443 739 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CACNB3P54284 484 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 RAB3GAP1Q15042 981 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 NECTIN1Q15223 517 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 PLA2G2CQ5R387 149 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TREML2Q5T2D2 321 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CPLX2Q6PUV4 134 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MB21D2Q8IYB1 491 aaPredicted RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 FAM133AQ8N9E0 248 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 TTC8Q8TAM2 541 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 SDR42E1Q8WUS8 393 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 CEP95Q96GE4 821 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 P2RX7Q99572 595 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 AMNQ9BXJ7 453 aa4.32□□□□□ -1.72
UBE3A-202ENST00000397954 MOV10L1Q9BXT6 1211 aaKnown RBP4.32□□□□□ -1.72
UBE3A-202ENST00000397954 COL1A2P08123 1366 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 A0A0D9SFI3 127 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 KBTBD13C9JR72 458 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 FOXP2O15409 715 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 CCL5P13501 91 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 MUTP22033 750 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 CDC42EP1Q00587 391 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 SETQ01105 290 aaPredicted RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 WTAPQ15007 396 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 IFIT1BQ5T764 474 aaKnown RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 RPAINQ86UA6 219 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 SIAH1Q8IUQ4 282 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 DAGLBQ8NCG7 672 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 CTCFLQ8NI51 663 aaPredicted RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 NINJ1Q92982 152 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 MAML3Q96JK9 1138 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 SUSD3Q96L08 255 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 LSG1Q9H089 658 aaKnown RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 TMX1Q9H3N1 280 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 C11orf49Q9H6J7 331 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 STK39Q9UEW8 545 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 SAP30BPQ9UHR5 308 aaKnown RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 KIF3AQ9Y496 699 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 PCDHB5Q9Y5E4 795 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 NFASCO94856 1347 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 WDR81Q562E7 1941 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 MYH15Q9Y2K3 1946 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 GOLGA8CPA6NN73 597 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 METTL12A8MUP2 240 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 ZBTB5O15062 677 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 IGHDP01880 384 aa4.31□□□□□ -1.72
UBE3A-202ENST00000397954 RPLP1P05386 114 aaKnown RBP4.31□□□□□ -1.72
UBE3A-202ENST00000397954 SUPT20HL2P0C7V6 817 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms