RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 CCDC39Q9UFE4 941 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 BRWD1Q9NSI6 2320 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 POTEMA6NI47 508 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 A6NJR5 290 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 PP2D1A8MPX8 630 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 IPO5O00410 1097 aaKnown RBP14.83□□□□□ -0.04
SEC13-209ENST00000397117 GAS7O60861 476 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 ARHGEF15O94989 841 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 IQCF3P0C7M6 154 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 ARP10275 920 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 ACTN1P12814 892 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 CDC25AP30304 524 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 TAP1Q03518 808 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 ZRSR1Q15695 479 aaKnown RBP14.83□□□□□ -0.04
SEC13-209ENST00000397117 GNPTABQ3T906 1256 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 LRCH2Q5VUJ6 765 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 KRT79Q5XKE5 535 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 NFRKBQ6P4R8 1299 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 CABP7Q86V35 215 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 CNNM3Q8NE01 707 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 SLC5A5Q92911 643 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 CDHR1Q96JP9 859 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 TIGD1Q96MW7 591 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 SLC9A7Q96T83 725 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 C1QTNF1Q9BXJ1 281 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 CERS4Q9HA82 394 aa14.83□□□□□ -0.04
SEC13-209ENST00000397117 HOOK1Q9UJC3 728 aaKnown RBP14.83□□□□□ -0.04
SEC13-209ENST00000397117 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 NKRFO15226 690 aaKnown RBP eCLIP14.82□□□□□ -0.04
SEC13-209ENST00000397117 MAFGO15525 162 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
SEC13-209ENST00000397117 KPNA6O60684 536 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 EIF3JO75822 258 aaKnown RBP14.82□□□□□ -0.04
SEC13-209ENST00000397117 EDNRBP24530 442 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 PTPN11Q06124 597 aaPredicted RBP14.82□□□□□ -0.04
SEC13-209ENST00000397117 CEP57L1Q8IYX8 460 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 ERMNQ8TAM6 284 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 PPP1R13LQ8WUF5 828 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 DHX58Q96C10 678 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 GPRASP2Q96D09 838 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 CALML4Q96GE6 196 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 CDK5RAP3Q96JB5 506 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 CCSER1Q9C0I3 900 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 AGO4Q9HCK5 861 aaKnown RBP14.82□□□□□ -0.04
SEC13-209ENST00000397117 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
SEC13-209ENST00000397117 TLL1O43897 1013 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 KARSQ15046 597 aaKnown RBP14.81□□□□□ -0.04
SEC13-209ENST00000397117 SKIV2LQ15477 1246 aaKnown RBP14.81□□□□□ -0.04
SEC13-209ENST00000397117 LONRF3Q496Y0 759 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 RRAGBQ5VZM2 374 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 KANK3Q6NY19 840 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 HERC6Q8IVU3 1022 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 RETREG2Q8NC44 543 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 INPP4AQ96PE3 977 aaPredicted RBP14.81□□□□□ -0.04
SEC13-209ENST00000397117 RIT2Q99578 217 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 TEKT3Q9BXF9 490 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 COG5Q9UP83 839 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 SYCE3A1L190 88 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 PSMD10O75832 226 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 STAT6P42226 847 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
SEC13-209ENST00000397117 FAM47CQ5HY64 1035 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 KRBA2Q6ZNG9 492 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 COPS5Q92905 334 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 FAM122AQ96E09 287 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 DISC1Q9NRI5 854 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 TBC1D22BQ9NU19 505 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 SERTAD1Q9UHV2 236 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 VAV3Q9UKW4 847 aa14.81□□□□□ -0.04
SEC13-209ENST00000397117 SLFN14P0C7P3 912 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 BFSP2Q13515 415 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 GSE1Q14687 1217 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 SCFD2Q8WU76 684 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 ARNTL2Q8WYA1 636 aa14.8□□□□□ -0.04
SEC13-209ENST00000397117 XIRP2A4UGR9 3374 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 A0A087X0B3 334 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 SLC26A4O43511 780 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 CHMP2AO43633 222 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 ACTN4O43707 911 aaKnown RBP14.79□□□□□ -0.04
SEC13-209ENST00000397117 LPXNO60711 386 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 CCT6AP40227 531 aaKnown RBP14.79□□□□□ -0.04
SEC13-209ENST00000397117 SPIRE1Q08AE8 756 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 GRB10Q13322 594 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 GPNMBQ14956 572 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 SEPT14Q6ZU15 432 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 CKAP2LQ8IYA6 745 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 PLIN2Q99541 437 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 EPHX3Q9H6B9 360 aa14.79□□□□□ -0.04
SEC13-209ENST00000397117 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms