RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SORCS3Q9UPU3 1222 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 NR2E1Q9Y466 385 aa17.14■□□□□ 0.33
SEC13-206ENST00000397102 DENND3A2RUS2 1198 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 PRR23AA6NEV1 266 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 C9IYK1 514 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 SP100P23497 879 aaPredicted RBP17.13■□□□□ 0.33
SEC13-206ENST00000397102 KIF5BP33176 963 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 NBL1P41271 181 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 STAT5BP51692 787 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 PLCB3Q01970 1234 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 NUCB1Q02818 461 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 MTMR3Q13615 1198 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
SEC13-206ENST00000397102 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 CWH43Q9H720 699 aa17.13■□□□□ 0.33
SEC13-206ENST00000397102 PTPRZ1P23471 2315 aaPredicted RBP17.13■□□□□ 0.33
SEC13-206ENST00000397102 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 DDAH1O94760 285 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 ACTR2P61160 394 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 UBE2SQ16763 222 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 LLGL2Q6P1M3 1020 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 IGDCC4Q8TDY8 1250 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 TCF25Q9BQ70 676 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 RWDD1Q9H446 243 aaPredicted RBP17.12■□□□□ 0.33
SEC13-206ENST00000397102 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
SEC13-206ENST00000397102 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
SEC13-206ENST00000397102 GINS2Q9Y248 185 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 NOC2LQ9Y3T9 749 aaKnown RBP17.12■□□□□ 0.33
SEC13-206ENST00000397102 EVPLQ92817 2033 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 NFASCO94856 1347 aa17.12■□□□□ 0.33
SEC13-206ENST00000397102 SPTBN4Q9H254 2564 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 E7EWF7 191 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 GPR182O15218 404 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 GNAQP50148 359 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 SLC26A2P50443 739 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 ANTXR2P58335 489 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 TMEM40Q8WWA1 233 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 CASP10Q92851 521 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 NECTIN4Q96NY8 510 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 ELAC1Q9H777 363 aaKnown RBP17.11■□□□□ 0.33
SEC13-206ENST00000397102 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 ST3GAL5Q9UNP4 418 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
SEC13-206ENST00000397102 FAM186AA6NE01 2351 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 BRD1O95696 1058 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 FGFR1P11362 822 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 KLRC1P26715 233 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 PDE4AP27815 886 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 AAMPQ13685 434 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 ERMP1Q7Z2K6 904 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 MXRA8Q9BRK3 442 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
SEC13-206ENST00000397102 C2CD4DB7Z1M9 353 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 HBP1O60381 514 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 ATG7O95352 703 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 PPM1AP35813 382 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 FAM189BP81408 668 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 PTH1RQ03431 593 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 ITIH3Q06033 890 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 CES5AQ6NT32 575 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
SEC13-206ENST00000397102 KIAA0319LQ8IZA0 1049 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
SEC13-206ENST00000397102 TMEM117Q9H0C3 514 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 ADAM7Q9H2U9 754 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 COL1A2P08123 1366 aa17.09■□□□□ 0.33
SEC13-206ENST00000397102 RIF1Q5UIP0 2472 aaKnown RBP17.08■□□□□ 0.33
SEC13-206ENST00000397102 IGKV6D-21A0A0A0MT36 114 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 HOXA2O43364 376 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 KRT17Q04695 432 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SEC13-206ENST00000397102 KCNT2Q6UVM3 1135 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 TMC7Q7Z402 723 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 NKD2Q969F2 451 aaPredicted RBP17.08■□□□□ 0.32
SEC13-206ENST00000397102 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 HCFC2Q9Y5Z7 792 aa17.08■□□□□ 0.32
SEC13-206ENST00000397102 MTHFRP42898 656 aa17.07■□□□□ 0.32
SEC13-206ENST00000397102 CRYBB1P53674 252 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms