RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ALKBH8Q96BT7 664 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 NXF1Q9UBU9 619 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 COPG1Q9Y678 874 aaKnown RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 CCND2P30279 289 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 CIITAP33076 1130 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 MXI1P50539 228 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 ALCAMQ13740 583 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 CDC37Q16543 378 aaPredicted RBP14.96□□□□□ -0.01
COL4A3-202ENST00000396578 PTPN21Q16825 1174 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 PARP9Q8IXQ6 854 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 LCMT1Q9UIC8 334 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 INPP5FQ9Y2H2 1132 aa14.96□□□□□ -0.01
COL4A3-202ENST00000396578 RASSF10A6NK89 507 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 GGCXP38435 758 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 BCAMP50895 628 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 KCNA1Q09470 495 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 LRRC8BQ6P9F7 803 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 CATSPER1Q8NEC5 780 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 ARMC2Q8NEN0 867 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 DNAJC6O75061 913 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 KRT27Q7Z3Y8 459 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 FSD1LQ9BXM9 530 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.02
COL4A3-202ENST00000396578 CTIFO43310 598 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 BTDP43251 543 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 SKOR1P84550 965 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 KLHL38Q2WGJ6 581 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 GRAMD1CQ8IYS0 662 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 NDUFAF2Q8N183 169 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 ZWILCHQ9H900 591 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 SUGT1Q9Y2Z0 365 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 ANXA13P27216 316 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 CARSP49589 748 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 ARMCX2Q7L311 632 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 BTBD6Q96KE9 485 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 MYOM2P54296 1465 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 GNL1P36915 607 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 MAGOHP61326 146 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 NSUN2Q08J23 767 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 DIAPH2O60879 1101 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 GYG1P46976 350 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 FBXW4P57775 412 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 PPP4R4Q6NUP7 873 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 PATL1Q86TB9 770 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 SCG3Q8WXD2 468 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 TGS1Q96RS0 853 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 SH3GL3Q99963 347 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 DDX28Q9NUL7 540 aaKnown RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 PLEKHG3A1L390 1219 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 PALMO75781 387 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 TBC1D10BQ4KMP7 808 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 NDST4Q9H3R1 872 aa14.95□□□□□ -0.02
COL4A3-202ENST00000396578 TRIM45Q9H8W5 580 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-202ENST00000396578 PPP2R2AP63151 447 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 KCNV2Q8TDN2 545 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 SRPRBQ9Y5M8 271 aaKnown RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 hCG_1984214I3L0E3 225 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 PLCG1P19174 1290 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 ZNF713Q8N859 430 aaPredicted RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 TBCKQ8TEA7 893 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 RBM41Q96IZ5 413 aaKnown RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 EPAS1Q99814 870 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 OSBPL1AQ9BXW6 950 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 TRPC1P48995 793 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 UBE3CQ15386 1083 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CDO1Q16878 200 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 OR6B2Q6IFH4 312 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 EMILIN3Q9NT22 766 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CAPRIN2Q6IMN6 1127 aaKnown RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 FAM47EQ6ZV65 393 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CD58P19256 250 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 RWDD4Q6NW29 188 aaKnown RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 TTC8Q8TAM2 541 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CDHR1Q96JP9 859 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CEP170P1Q96L14 293 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CYP26B1Q9NR63 512 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 KDM5DQ9BY66 1539 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 TCP10L2B9ZVM9 353 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 SPATA17Q96L03 361 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL4A3-202ENST00000396578 ITM2BQ9Y287 266 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 POTEB3A0JP26 581 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 H0Y626 953 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 TRIM16O95361 564 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 ESRRBO95718 433 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 APOA5Q6Q788 366 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 POTEBQ6S5H4 581 aa14.94□□□□□ -0.02
COL4A3-202ENST00000396578 CATSPER3Q86XQ3 398 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 GIMAP4Q9NUV9 329 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 CNGA3Q16281 694 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 KCTD1Q719H9 257 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 STX19Q8N4C7 294 aa14.93□□□□□ -0.02
COL4A3-202ENST00000396578 MB21D1Q8N884 522 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms