RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 GABPAQ06546 454 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 FMR1Q06787 632 aaKnown RBP eCLIP6.33□□□□□ -1.42e-6■■■□□ 17
MATR3-230ENST00000394800 SNX1Q13596 522 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 FXNQ16595 210 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 RAPGEF5Q92565 580 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 SIKE1Q9BRV8 207 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
MATR3-230ENST00000394800 TADA3O75528 432 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 NLRP5P59047 1200 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TSTA3Q13630 321 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 SKIDA1Q1XH10 827 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 KBTBD12Q3ZCT8 623 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 KANK3Q6NY19 840 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MMS22LQ6ZRQ5 1243 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 NEDD1Q8NHV4 660 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SPAG5Q96R06 1193 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TTC1Q99614 292 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SH3GL2Q99962 352 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 VCPKMTQ9H867 229 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 AKAP7Q9P0M2 348 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 SNX6Q9UNH7 406 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TSC22D4Q9Y3Q8 395 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 USH1CQ9Y6N9 552 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 CAPN7Q9Y6W3 813 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 GSTTP1A0A1W2PQM5 241 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 KLRF2D3W0D1 207 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 AKR1B1P15121 316 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 GSTO1P78417 241 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 Q3C1V9 767 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TRMT44Q8IYL2 757 aaKnown RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 SAMD3Q8N6K7 520 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SYMPKQ92797 1274 aaKnown RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 TMEM60Q9H2L4 133 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 CD2APQ9Y5K6 639 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 RASA4BC9J798 803 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 STAMBPO95630 424 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MCM7P33993 719 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PTGS2P35354 604 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SCNN1AP37088 669 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SARSP49591 514 aaKnown RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 POSTNQ15063 836 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 WHAMMP3Q1A5X7 153 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 APOBEC3HQ6NTF7 200 aaKnown RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 DPP8Q6V1X1 898 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 NLRP14Q86W24 1093 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PASD1Q8IV76 773 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PIP4K2CQ8TBX8 421 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MAF1Q9H063 256 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 ZNF304Q9HCX3 659 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 INTS13Q9NVM9 706 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 BAIAP2L1Q9UHR4 511 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MYH4Q9Y623 1939 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 A0A1W2PRQ8 180 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 GOLGA8JA6NMD2 632 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 USP27XA6NNY8 438 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PP2D1A8MPX8 630 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 GOLGA8TH3BQL2 631 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 ESRRAP11474 423 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 CASP2P42575 452 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 AFMP43652 599 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TUFMP49411 452 aaKnown RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 TUBA3CQ13748 450 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 GRM4Q14833 912 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 C10orf76Q5T2E6 689 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SMYD4Q8IYR2 804 aaPredicted RBP6.32□□□□□ -1.4
MATR3-230ENST00000394800 C4orf32Q8N8J7 132 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 ARMC2Q8NEN0 867 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SPATA20Q8TB22 786 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 SMARCE1Q969G3 411 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 VAT1LQ9HCJ6 419 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 PALMDQ9NP74 551 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 KMT5AQ9NQR1 393 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 CNGB3Q9NQW8 809 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 MAN1B1Q9UKM7 699 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 TRPC6Q9Y210 931 aa6.32□□□□□ -1.4
MATR3-230ENST00000394800 EEF2P13639 858 aaKnown RBP6.31□□□□□ -1.4
MATR3-230ENST00000394800 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
MATR3-230ENST00000394800 HLTFQ14527 1009 aaKnown RBP eCLIP6.31□□□□□ -1.4
MATR3-230ENST00000394800 LRRC8AQ8IWT6 810 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 ZNF579Q8NAF0 562 aaKnown RBP6.31□□□□□ -1.4
MATR3-230ENST00000394800 LRRC15Q8TF66 581 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 TBC1D22AQ8WUA7 517 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 ALS2CR12Q96Q35 445 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 COA1Q9GZY4 146 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 DNAJC18Q9H819 358 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 RGS17Q9UGC6 210 aaPredicted RBP6.31□□□□□ -1.4
MATR3-230ENST00000394800 CEP350Q5VT06 3117 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 TMEM232C9JQI7 657 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 NPR1P16066 1061 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 ECE1P42892 770 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 HSD17B7P56937 341 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 ARPC4P59998 168 aa6.31□□□□□ -1.4
MATR3-230ENST00000394800 OASLQ15646 514 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms