RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 NECAB3Q96P71 396 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 UHRF1Q96T88 793 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
APOBEC3F-202ENST00000381565 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 BACH1O14867 736 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 CHMP2AO43633 222 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 ST18O60284 1047 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 ZNF862O60290 1169 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 CAND2O75155 1236 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 GNAT1P11488 350 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 SLC26A2P50443 739 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 IGBP1P78318 339 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 MGAT3Q09327 533 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 HAS1Q92839 578 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 COL1A2P08123 1366 aa13.04□□□□□ -0.32
APOBEC3F-202ENST00000381565 TTC3P53804 2025 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 PARNO95453 639 aaKnown RBP13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 PSAPP07602 524 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 BMP1P13497 986 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 HMGN5P82970 282 aaKnown RBP13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 TFF2Q03403 129 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 TAF2Q6P1X5 1199 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
APOBEC3F-202ENST00000381565 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 EML1O00423 815 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 HBP1O60381 514 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 ARHGEF15O94989 841 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 CHRNA1P02708 482 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 JAK3P52333 1124 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 SPIRE1Q08AE8 756 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 TRIM29Q14134 588 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 MTIF3Q9H2K0 278 aaKnown RBP13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 FNDC1Q4ZHG4 1894 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3F-202ENST00000381565 RFXAPO00287 272 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 TBX3O15119 743 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 STBD1O95210 358 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 C22orf31O95567 290 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 SFNP31947 248 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 KCNQ1P51787 676 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 PRKCEQ02156 737 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 PLEKHG4Q58EX7 1191 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 PCDHA2Q9Y5H9 948 aa13.01□□□□□ -0.33
APOBEC3F-202ENST00000381565 OATP04181 439 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 CA3P07451 260 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 ACTN1P12814 892 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
APOBEC3F-202ENST00000381565 PLA2G5P39877 138 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 DEFB103AP81534 67 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 MRPS6P82932 125 aaKnown RBP13□□□□□ -0.33
APOBEC3F-202ENST00000381565 PLCB2Q00722 1185 aa13□□□□□ -0.33
APOBEC3F-202ENST00000381565 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms