RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ZRANB2O95218 330 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 TSTA3Q13630 321 aaPredicted RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 RAD54LQ92698 747 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CALR3Q96L12 384 aaKnown RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 ZNF341Q9BYN7 854 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 GINM1Q9NU53 330 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CNOT8Q9UFF9 292 aaKnown RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 FAF1Q9UNN5 650 aaPredicted RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 LRRC53A6NM62 1247 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CASP1P29466 404 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 TMEM35BQ8NCS4 154 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 ANAPC7Q9UJX3 599 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 KRT37O76014 449 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 RPSAP08865 295 aaKnown RBP17.23■□□□□ 0.35
COL2A1-202ENST00000380518 PSMA2P25787 234 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CASP2P42575 452 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 TMCO4Q5TGY1 634 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 CIAPIN1Q6FI81 312 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 NLRP4Q96MN2 994 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 PLAAQ9Y263 795 aa17.23■□□□□ 0.35
COL2A1-202ENST00000380518 ESRRAP11474 423 aaPredicted RBP17.22■□□□□ 0.35
COL2A1-202ENST00000380518 PLS3P13797 630 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
COL2A1-202ENST00000380518 DCP1AQ9NPI6 582 aaPredicted RBP17.22■□□□□ 0.35
COL2A1-202ENST00000380518 ARL13BQ3SXY8 428 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 SNX24Q9Y343 169 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 KDM6BO15054 1643 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 ARAP3Q8WWN8 1544 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 PRELPP51888 382 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 SNAP25P60880 206 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 GPC5P78333 572 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 SEMA3FQ13275 785 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 TMTC4Q5T4D3 741 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 RTKN2Q8IZC4 609 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 CFAP36Q96G28 342 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
COL2A1-202ENST00000380518 WDR91A4D1P6 747 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 PEX19P40855 299 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 KCNH2Q12809 1159 aa17.22■□□□□ 0.35
COL2A1-202ENST00000380518 MAPK13O15264 365 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 HSPA8P11142 646 aaKnown RBP17.21■□□□□ 0.35
COL2A1-202ENST00000380518 TFDP2Q14188 446 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 TTC13Q8NBP0 860 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 RNF139Q8WU17 664 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-202ENST00000380518 DRC3Q9H069 523 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-202ENST00000380518 TBC1D22BQ9NU19 505 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 DNAJC17Q9NVM6 304 aaKnown RBP17.21■□□□□ 0.35
COL2A1-202ENST00000380518 SKIP12755 728 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 MTMR1Q13613 665 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 MAGED2Q9UNF1 606 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-202ENST00000380518 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 MX2P20592 715 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 GUCY2CP25092 1073 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 PADI6Q6TGC4 694 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 LCMT1Q9UIC8 334 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 UTYO14607 1347 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 KRT10P13645 584 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 ARL4CP56559 192 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 COASYQ13057 564 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 FAM83BQ5T0W9 1011 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 TRIM4Q9C037 500 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 KLC2Q9H0B6 622 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 ZWILCHQ9H900 591 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
COL2A1-202ENST00000380518 E9PMD0 336 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF18P17022 549 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ESRRGP62508 458 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SPARCL1Q14515 664 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 GRM4Q14833 912 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 RYBPQ8N488 228 aaPredicted RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L19D6RCP7 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L20D6RJB6 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 SNAP23O00161 211 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 GNGT2O14610 69 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 IREB2P48200 963 aaKnown RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L24Q0WX57 530 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
COL2A1-202ENST00000380518 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 VPS39Q96JC1 886 aa17.2■□□□□ 0.34
COL2A1-202ENST00000380518 FAM167AQ96KS9 214 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms