RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DPH5Q9H2P9 285 aa8.87□□□□□ -0.99
CKAP2-203ENST00000378037 UNC45AQ9H3U1 944 aa8.87□□□□□ -0.99
CKAP2-203ENST00000378037 COL4A1P02462 1669 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 NR3C1P04150 777 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 MESDQ14696 234 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 TRIP13Q15645 432 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 KAZNQ674X7 775 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 UNC13DQ70J99 1090 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 DAAM2Q86T65 1068 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 RHPN2Q8IUC4 686 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 TRIML1Q8N9V2 468 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 ZNF579Q8NAF0 562 aaKnown RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 IFT74Q96LB3 600 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 GBP3Q9H0R5 595 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 BLOC1S4Q9NUP1 217 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 PTPN22Q9Y2R2 807 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 SPOPO43791 374 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 FOSP01100 380 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 NFRKBQ6P4R8 1299 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 FBXO38Q6PIJ6 1188 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 STXBP4Q6ZWJ1 553 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 TMTC1Q8IUR5 882 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 SLC30A5Q8TAD4 765 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 P2RX7Q99572 595 aaKnown RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 CBWD1Q9BRT8 395 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 MMTAG2Q9BU76 263 aaKnown RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 LRRC27Q9C0I9 530 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 LACRTQ9GZZ8 138 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 AS3MTQ9HBK9 375 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 LUC7LQ9NQ29 371 aaKnown RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 MAGED2Q9UNF1 606 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 GSTTP1A0A1W2PQM5 241 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 F5H423 210 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-203ENST00000378037 CYP11B2P19099 503 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 FGFR4P22455 802 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 STRN3Q13033 797 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 LY6KQ17RY6 165 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 VWA3BQ502W6 1294 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 PAF1Q8N7H5 531 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 RABGGTAQ92696 567 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 WDR18Q9BV38 432 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 IMPACTQ9P2X3 320 aa8.86□□□□□ -0.99
CKAP2-203ENST00000378037 NUP98P52948 1817 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 CALUO43852 315 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 ENTPD3O75355 529 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 GGPS1O95749 300 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 CYP2B6P20813 491 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 KIF11P52732 1056 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 ERVK-24P63145 666 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 SPDYE2Q495Y8 402 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 KCTD16Q68DU8 428 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 HAUS1Q96CS2 278 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 AK8Q96MA6 479 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 PACSIN1Q9BY11 444 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 ARFGAP3Q9NP61 516 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 KLHL11Q9NVR0 708 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 VPS18Q9P253 973 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 KDM3AQ9Y4C1 1321 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 GOLGA8SH3BPF8 625 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 CTNNA2P26232 953 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 HPDP32754 393 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 KRT83P78385 493 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 GABPAQ06546 454 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 SNX1Q13596 522 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 GNPTABQ3T906 1256 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 HP1BP3Q5SSJ5 553 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 SLC7A3Q8WY07 619 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 COL20A1Q9P218 1284 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 FHOD1Q9Y613 1164 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 YWHABP31946 246 aaKnown RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 PRELPP51888 382 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 NCBP1Q09161 790 aaKnown RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 MAN2A1Q16706 1144 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 PRAMEF19Q5SWL8 479 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 TREML2Q5T2D2 321 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 SIAH1Q8IUQ4 282 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 ZSWIM2Q8NEG5 633 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 TRIM6Q9C030 488 aaPredicted RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 TMX2Q9Y320 296 aa8.85□□□□□ -0.99
CKAP2-203ENST00000378037 DICER1Q9UPY3 1922 aaKnown RBP8.85□□□□□ -0.99
CKAP2-203ENST00000378037 LGALS16A8MUM7 142 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ZEB2O60315 1214 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 STX10O60499 249 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 BUB1BO60566 1050 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ATP1A1P05023 1023 aaKnown RBP8.84□□□□□ -0.99
CKAP2-203ENST00000378037 CTSHP09668 335 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ITGB5P18084 799 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 FSTL1Q12841 308 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 VGLL4Q14135 290 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 C7orf31Q8N865 590 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 LENG1Q96BZ8 264 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 LTBP1Q14766 1721 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 STAT1P42224 750 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms