RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 TSPY2A6NKD2 308 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
PBX3-204ENST00000373489 RPS6KA4O75676 772 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 MMP13P45452 471 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 BLMHQ13867 455 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 SLC29A2Q14542 456 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 RBBP5Q15291 538 aaKnown RBP17.42■□□□□ 0.38
PBX3-204ENST00000373489 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 NELFCDQ8IXH7 590 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 GLG1Q92896 1179 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 RNF25Q96BH1 459 aaPredicted RBP17.42■□□□□ 0.38
PBX3-204ENST00000373489 DBR1Q9UK59 544 aaKnown RBP17.42■□□□□ 0.38
PBX3-204ENST00000373489 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
PBX3-204ENST00000373489 LAMB2P55268 1798 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 TAF1P21675 1872 aa17.42■□□□□ 0.38
PBX3-204ENST00000373489 FGGP02679 453 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 ZNF571Q7Z3V5 609 aaPredicted RBP17.41■□□□□ 0.38
PBX3-204ENST00000373489 DYDC1Q8WWB3 177 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 TSG101Q99816 390 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 EDEM3Q9BZQ6 932 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 EPB41L4BQ9H329 900 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 FGFR1OP2Q9NVK5 253 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 COL4A3BPQ9Y5P4 624 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 M0R2N6 131 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 ALADP13716 330 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
PBX3-204ENST00000373489 PMS2P54278 862 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 EIF3BP55884 814 aaKnown RBP17.41■□□□□ 0.38
PBX3-204ENST00000373489 DENND2CQ68D51 928 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 GUF1Q8N442 669 aaKnown RBP17.41■□□□□ 0.38
PBX3-204ENST00000373489 LRRC57Q8N9N7 239 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 EPS8L3Q8TE67 593 aaKnown RBP17.41■□□□□ 0.38
PBX3-204ENST00000373489 ATP8B4Q8TF62 1192 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 PLCD4Q9BRC7 762 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 MAGEF1Q9HAY2 307 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 FAM114A2Q9NRY5 505 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 BLOC1S4Q9NUP1 217 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 ADAM22Q9P0K1 906 aa17.41■□□□□ 0.38
PBX3-204ENST00000373489 BHMG1C9JSJ3 638 aaPredicted RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 CCDC188H7C350 402 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 SNX3O60493 162 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 PPFIA2O75334 1257 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 UNC13DQ70J99 1090 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 SRP68Q9UHB9 627 aaKnown RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 PECAM1P16284 738 aaPredicted RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 MSH2P43246 934 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 RWDD2BP57060 319 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 LRRC63Q05C16 580 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 TPCN2Q8NHX9 752 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 ZFATQ9P243 1243 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
PBX3-204ENST00000373489 BAZ2AQ9UIF9 1905 aaKnown RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 ATP4AP20648 1035 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 KIF5BP33176 963 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 EPS15P42566 896 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 COPS2P61201 443 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 GRB10Q13322 594 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 SLMAPQ14BN4 828 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 ALKBH5Q6P6C2 394 aaKnown RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 SYN2Q92777 582 aaPredicted RBP17.4■□□□□ 0.38
PBX3-204ENST00000373489 CNKSR1Q969H4 720 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 HOMER3Q9NSC5 361 aa17.4■□□□□ 0.38
PBX3-204ENST00000373489 MYH4Q9Y623 1939 aa17.39■□□□□ 0.38
PBX3-204ENST00000373489 DPPA5A6NC42 116 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 ANKRD33BA6NCL7 494 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 TCP11X1B4DZS4 312 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 PDHA1P08559 390 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 GOLGA8HP0CJ92 632 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 AK8Q96MA6 479 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
PBX3-204ENST00000373489 SEMA4AQ9H3S1 761 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 SLITRK6Q9H5Y7 841 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 CES2O00748 559 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 SLC35G1Q2M3R5 365 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 FBXO25Q8TCJ0 367 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
PBX3-204ENST00000373489 DDX12PQ92771 950 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 NAF1Q96HR8 494 aaKnown RBP17.39■□□□□ 0.37
PBX3-204ENST00000373489 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
PBX3-204ENST00000373489 FGFBP2Q9BYJ0 223 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
PBX3-204ENST00000373489 MINPP1Q9UNW1 487 aa17.39■□□□□ 0.37
PBX3-204ENST00000373489 CCDC169A6NNP5 214 aa17.38■□□□□ 0.37
PBX3-204ENST00000373489 FOXO6A8MYZ6 492 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms