RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 TAC1P20366 129 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 TAF1BQ53T94 588 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 LSM14BQ9BX40 385 aaKnown RBP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 CFLARO15519 480 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 AARSP49588 968 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 AP1S2P56377 157 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 AGBL2Q5U5Z8 902 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 PLEKHA7Q6IQ23 1121 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 TRIM50Q86XT4 487 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 ARHGEF1Q92888 912 aaKnown RBP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 CCDC59Q9P031 241 aaKnown RBP7.51□□□□□ -1.21
CSMD2-206ENST00000373388 H0YCG3 227 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 MAP3K13O43283 966 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 COPS2P61201 443 aa7.51□□□□□ -1.21
CSMD2-206ENST00000373388 DISP3Q9P2K9 1392 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PMS2P54278 862 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 CDC37L1Q7L3B6 337 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PCGF5Q86SE9 256 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PAG1Q9NWQ8 432 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 C15orf41Q9Y2V0 281 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 MYH7P12883 1935 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ACSL3O95573 720 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PFKFB1P16118 471 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 NAA35Q5VZE5 725 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PRUNE1Q86TP1 453 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 SUN5Q8TC36 379 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 HACD3Q9P035 362 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ORC4O43929 436 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TNFAIP8O95379 198 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 POTEIP0CG38 1075 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TRMT5Q32P41 509 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 LONP2Q86WA8 852 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 U2AF1L4Q8WU68 220 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 AGBL1Q96MI9 1066 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 NLRP4Q96MN2 994 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 RPRD2Q5VT52 1461 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 GOLGA8JA6NMD2 632 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 BIRC5O15392 142 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 GTPBP6O43824 516 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ZBED6P86452 979 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 C2orf54Q08AI8 447 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 NR5A1Q13285 461 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 SIX5Q8N196 739 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 DHTKD1Q96HY7 919 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 C19orf44Q9H6X5 657 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 IARS2Q9NSE4 1012 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 MAP3K20Q9NYL2 800 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 FAM45BPQ6NSW5 357 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PIK3R2O00459 728 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 IQCB1Q15051 598 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TAF1DQ9H5J8 278 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 DIDO1Q9BTC0 2240 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ARHGEF12Q9NZN5 1544 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 CCT3P49368 545 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ARL4CP56559 192 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 BBS9Q3SYG4 887 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ARMC4Q5T2S8 1044 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 VPS39Q96JC1 886 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PLIN2Q99541 437 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 NCLNQ969V3 563 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 GOLPH3LQ9H4A5 285 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 PLS3P13797 630 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 SFR1Q86XK3 245 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 CCDC36Q8IYA8 594 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ZBTB40Q9NUA8 1239 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 MYO9BQ13459 2157 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 MEIS1O00470 390 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 KLHL2O95198 593 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 STARD3NLO95772 234 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TNNI2P48788 182 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TTC38Q5R3I4 469 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 ATP6V1E2Q96A05 226 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 FANCLQ9NW38 375 aa7.5□□□□□ -1.21
CSMD2-206ENST00000373388 TRMT112Q9UI30 125 aaKnown RBP7.5□□□□□ -1.21
CSMD2-206ENST00000373388 RGS21Q2M5E4 152 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 SLC26A7Q8TE54 656 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 EPC1Q9H2F5 836 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 COPEO14579 308 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 TBC1D12O60347 775 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 HSPA2P54652 639 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 PUDPQ08623 228 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 TRIP10Q15642 601 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 SPANXN2Q5MJ10 180 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 KRT25Q7Z3Z0 450 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 RPS6KC1Q96S38 1066 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 SBNO2Q9Y2G9 1366 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 PSMA3P25788 255 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 ARFIP2P53365 341 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 ZNF473Q8WTR7 871 aaKnown RBP7.49□□□□□ -1.21
CSMD2-206ENST00000373388 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSMD2-206ENST00000373388 STX8Q9UNK0 236 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 PI4KAP2A4QPH2 592 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 IGF2BP3O00425 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSMD2-206ENST00000373388 ZBTB39O15060 712 aa7.49□□□□□ -1.21
CSMD2-206ENST00000373388 USP14P54578 494 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms