RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSMD2-203ENST00000373377 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
CSMD2-203ENST00000373377 LRRN2O75325 713 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 MMEP08473 750 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 H2AFZP0C0S5 128 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
CSMD2-203ENST00000373377 ELF1P32519 619 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 CASP4P49662 377 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 USP11P51784 963 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 KCNA1Q09470 495 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 PPP4R3AQ6IN85 833 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 H2AFVQ71UI9 128 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 RUBCNQ92622 972 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 MTMR9Q96QG7 549 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 FMO2Q99518 471 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 GCNT4Q9P109 453 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 STK38LQ9Y2H1 464 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
CSMD2-203ENST00000373377 FLOT1O75955 427 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 NEBLO76041 1014 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 CHN1P15882 459 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 NFIXQ14938 502 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 UBAP2Q5T6F2 1119 aaKnown RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 DPP8Q6V1X1 898 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 VPS36Q86VN1 386 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 DNAJC19Q96DA6 116 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 SETDB2Q96T68 719 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 AZI2Q9H6S1 392 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 VEZTQ9HBM0 779 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 AJAP1Q9UKB5 411 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 L3MBTL1Q9Y468 752 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 FOXO6A8MYZ6 492 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 RSPH10B2B2RC85 870 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 GCNT3O95395 438 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 RSPH10BP0C881 870 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 FGFR4P22455 802 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 GSCP56915 257 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 PSMC6P62333 389 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 CUL1Q13616 776 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 TRIM59Q8IWR1 403 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 ZNF646O15015 1829 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 MYBP10242 640 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 IFI35P80217 286 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 MYO1EQ12965 1108 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 ACCSLQ4AC99 568 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 PRR16Q569H4 304 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 TMC3Q7Z5M5 1100 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 SFR1Q86XK3 245 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 MREGQ8N565 214 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 TPCN2Q8NHX9 752 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
CSMD2-203ENST00000373377 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 SLC12A6Q9UHW9 1150 aa10.63□□□□□ -0.71
CSMD2-203ENST00000373377 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 RASSF9O75901 435 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 GALCP54803 685 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 SF3B3Q15393 1217 aaKnown RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 ZKSCAN8Q15776 578 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 IFI16Q16666 785 aaKnown RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 AMIGO3Q86WK7 504 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 ANKRD42Q8N9B4 389 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 HAS1Q92839 578 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 SGSM3Q96HU1 749 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 MTFR1LQ9H019 292 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 AMFRQ9UKV5 643 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 H0YGN5 161 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 RGS16O15492 202 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 CHMP2AO43633 222 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 AFPP02771 609 aaKnown RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 PAX7P23759 505 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 RFC4P35249 363 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 TBC1D10BQ4KMP7 808 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 SLC10A5Q5PT55 438 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 CD302Q8IX05 232 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 KIF2BQ8N4N8 673 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 CCDC197Q8NCU1 140 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 CHMP6Q96FZ7 201 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 PBKQ96KB5 322 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 PSTPIP2Q9H939 334 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 NFS1Q9Y697 457 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 F8VZ95 297 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 RBAK-RBAKDNI3L0D1 243 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 PON1P27169 355 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 DR1Q01658 176 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 BIRC3Q13489 604 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 USH1GQ495M9 461 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
CSMD2-203ENST00000373377 DENND2CQ68D51 928 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 MAEAQ7L5Y9 396 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 IRF2BP2Q7Z5L9 587 aa10.62□□□□□ -0.71
CSMD2-203ENST00000373377 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms