RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 SGK1O00141 431 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 ANTXR2P58335 489 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 DR1Q01658 176 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 KAZNQ674X7 775 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 PRR5LQ6MZQ0 368 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 TTC16Q8NEE8 873 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 VCX3BQ9H321 246 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 INTS9Q9NV88 658 aaKnown RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 TMEM260Q9NX78 707 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 CAPN11Q9UMQ6 739 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 LPXNO60711 386 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 SUN1O94901 812 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 PSMC5P62195 406 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 MGARPQ8TDB4 240 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 LRRC8CQ8TDW0 803 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 HMGB1P1B2RPK0 211 aaPredicted RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 POTECB2RU33 542 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 PDXKO00764 312 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 INHBAP08476 426 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 AP3M2P53677 418 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 LRRC53A6NM62 1247 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 TBXAS1P24557 533 aaPredicted RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 CACNB3P54284 484 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 PTPROQ16827 1216 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
NUP188-201ENST00000372577 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
NUP188-201ENST00000372577 PFASO15067 1338 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 ESYT2A0FGR8 921 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 EVI5O60447 810 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 CASP8Q14790 479 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 IQCB1Q15051 598 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 BZW1Q7L1Q6 419 aaKnown RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GOLGA8QA0A0J9YX86 632 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 A0A1B0GTH6 734 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GOLGA8OA6NCC3 632 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GOLGA8NF8WBI6 632 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PPP4CP60510 307 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GPC5P78333 572 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 GABPAQ06546 454 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PNMA8AQ86V59 439 aaPredicted RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PIGOQ8TEQ8 1089 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 RILPQ96NA2 401 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 FMO2Q99518 471 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 EPB41L4AQ9HCS5 686 aaPredicted RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 RNF146Q9NTX7 359 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 ARL4AP40617 200 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PLTPP55058 493 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 DPYDQ12882 1025 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 NLRP7Q8WX94 980 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 LPAR1Q92633 364 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 CAV1Q03135 178 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
NUP188-201ENST00000372577 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
NUP188-201ENST00000372577 TDP2O95551 362 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 MYBL1P10243 752 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 CNGA1P29973 690 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
NUP188-201ENST00000372577 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 NME8Q8N427 588 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 CCDC197Q8NCU1 140 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 STRIP2Q9ULQ0 834 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 IPO5O00410 1097 aaKnown RBP11.29□□□□□ -0.6
NUP188-201ENST00000372577 CALB1P05937 261 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TRIM72Q6ZMU5 477 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 DAGLBQ8NCG7 672 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms