RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 PDILTQ8N807 584 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 CNBD1Q8NA66 436 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 FAM84BQ96KN1 310 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 TRAPPC9Q96Q05 1148 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 RUFY1Q96T51 708 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 RIOK1Q9BRS2 568 aaKnown RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 FAM167BQ9BTA0 163 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 MTA3Q9BTC8 594 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 RNF41Q9H4P4 317 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 LEMD3Q9Y2U8 911 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 NID2Q14112 1375 aa9.66□□□□□ -0.86
ATG4A-203ENST00000372232 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
ATG4A-203ENST00000372232 HSF2BPO75031 334 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 FGRP09769 529 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 NR1D1P20393 614 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 GLE1Q53GS7 698 aaKnown RBP9.65□□□□□ -0.86
ATG4A-203ENST00000372232 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 ANO7Q6IWH7 933 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SESTD1Q86VW0 696 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SH2D3CQ8N5H7 860 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SDR42E1Q8WUS8 393 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 NAF1Q96HR8 494 aaKnown RBP9.65□□□□□ -0.86
ATG4A-203ENST00000372232 IWS1Q96ST2 819 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 CORO1BQ9BR76 489 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 BRD8Q9H0E9 1235 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.86
ATG4A-203ENST00000372232 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SRP68Q9UHB9 627 aaKnown RBP9.65□□□□□ -0.86
ATG4A-203ENST00000372232 STK36Q9NRP7 1315 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.86
ATG4A-203ENST00000372232 SLC3A2P08195 630 aaKnown RBP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 IFNAR1P17181 557 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 JUNDP17535 347 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 PSEN2P49810 448 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 CKAP4Q07065 602 aaKnown RBP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 SSRP1Q08945 709 aaKnown RBP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 WTAPQ15007 396 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 POSTNQ15063 836 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 CCDC92Q53HC0 331 aaPredicted RBP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 APBB1IPQ7Z5R6 666 aaPredicted RBP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 CCDC63Q8NA47 563 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 IFT43Q96FT9 208 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 SEC16BQ96JE7 1060 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 DHRS1Q96LJ7 313 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 NLRP3Q96P20 1036 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 ZKSCAN3Q9BRR0 538 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 SLC26A6Q9BXS9 759 aa9.65□□□□□ -0.87
ATG4A-203ENST00000372232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.65□□□□□ -0.87
ATG4A-203ENST00000372232 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 UBE2Q2LH0YL09 131 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 IPO5O00410 1097 aaKnown RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 ZPR1O75312 459 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CMA1P23946 247 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 TUBP50607 506 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 PHEXP78562 749 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 TRIM29Q14134 588 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 INF2Q27J81 1249 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 FAM26DQ5JW98 314 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SPTY2D1Q68D10 685 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 BRICD5Q6PL45 260 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 ERICH1Q86X53 443 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CACNA2D3Q8IZS8 1091 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CAVIN3Q969G5 261 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 RRP36Q96EU6 259 aaKnown RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 MMS19Q96T76 1030 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SLC12A4Q9UP95 1085 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 ATP8A1Q9Y2Q0 1164 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 PEX14O75381 377 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CCDC166P0CW27 439 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 MYBL1P10243 752 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 KLRK1P26718 216 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 RCAN1P53805 252 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SESN3P58005 492 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 PTPAQ15257 358 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 IFI16Q16666 785 aaKnown RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 RTN1Q16799 776 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CD302Q8IX05 232 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 ZBTB8BQ8NAP8 495 aaPredicted RBP9.64□□□□□ -0.87
ATG4A-203ENST00000372232 WASF1Q92558 559 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 NDNQ99608 321 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 CFHR5Q9BXR6 569 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 NACA2Q9H009 215 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 PANK4Q9NVE7 773 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms