RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 PREBQ9HCU5 417 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 PALMDQ9NP74 551 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 REREQ9P2R6 1566 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 GSTA1P08263 222 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 ATICP31939 592 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 IRX4P78413 519 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 PTPN12Q05209 780 aaKnown RBP12.67□□□□□ -0.38
PTPN1-201ENST00000371621 OVGP1Q12889 678 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 ZNF570Q96NI8 536 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 Q9H521 79 aa12.67□□□□□ -0.38
PTPN1-201ENST00000371621 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 GOLGA8RI6L899 631 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 MGRN1O60291 552 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 OATP04181 439 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 FESP07332 822 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 KCNJ1P48048 391 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 PEX5P50542 639 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 MTM1Q13496 603 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 C4orf33Q8N1A6 199 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ERLEC1Q96DZ1 483 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 S100BP04271 92 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 GSTA2P09210 222 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ATF2P15336 505 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ELOA2Q8IYF1 753 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 IFNL3Q8IZI9 196 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 HSD3B7Q9H2F3 369 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 PDP2Q9P2J9 529 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ITGA4P13612 1032 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 USP46P62068 366 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 PSMC1P62191 440 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 SPARCL1Q14515 664 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 TMTC3Q6ZXV5 915 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 DRAXINQ8NBI3 349 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 THTPAQ9BU02 230 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 DCLRE1BQ9H816 532 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 RNPEPL1Q9HAU8 725 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 PLCG1P19174 1290 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ADARP55265 1226 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 KAZNQ674X7 775 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 GALNT17Q6IS24 598 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 IZUMO2Q6UXV1 221 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
PTPN1-201ENST00000371621 IFT122Q9HBG6 1241 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
PTPN1-201ENST00000371621 A0A1W2PQC6 194 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 PRKAB2O43741 272 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 CCNFP41002 786 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 PPP1R2P41236 205 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 DPYDQ12882 1025 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 ITIH4Q14624 930 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 PPP2R5EQ16537 467 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 GALNT15Q8N3T1 639 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 MAB21L3Q8N8X9 362 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
PTPN1-201ENST00000371621 CCT6BQ92526 530 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 DDX12PQ92771 950 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 C9orf72Q96LT7 481 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 TMEM60Q9H2L4 133 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
PTPN1-201ENST00000371621 ANAPC5Q9UJX4 755 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 LRCH1Q9Y2L9 728 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 DRD4P21917 467 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
PTPN1-201ENST00000371621 KYNUQ16719 465 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 SPRED3Q2MJR0 410 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
PTPN1-201ENST00000371621 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
PTPN1-201ENST00000371621 AGTP01019 485 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 HOXB7P09629 217 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 SRGNP10124 158 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 AP2B1P63010 937 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 PDXDC1Q6P996 788 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 ANO5Q75V66 913 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 TRIM50Q86XT4 487 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 WDR75Q8IWA0 830 aaKnown RBP12.65□□□□□ -0.39
PTPN1-201ENST00000371621 TTC8Q8TAM2 541 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms