RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
COL11A1-203ENST00000370096 ATXN7L3BQ96GX2 97 aa11.89□□□□□ -0.51
COL11A1-203ENST00000370096 TTC25Q96NG3 672 aa11.89□□□□□ -0.51
COL11A1-203ENST00000370096 EPAS1Q99814 870 aa11.89□□□□□ -0.51
COL11A1-203ENST00000370096 SRGAP2CP0DJJ0 459 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 CCDC15Q0P6D6 951 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 DHX38Q92620 1227 aaKnown RBP11.88□□□□□ -0.51
COL11A1-203ENST00000370096 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
COL11A1-203ENST00000370096 ORC4O43929 436 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 SEPT2Q15019 361 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 PDIK1LQ8N165 341 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 CEP170P1Q96L14 293 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 LRRC37BQ96QE4 947 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 PPP6R2O75170 966 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 CASS4Q9NQ75 786 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 LRRC24Q50LG9 513 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 KIAA1841Q6NSI8 718 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 TBL3Q12788 808 aaKnown RBP11.88□□□□□ -0.51
COL11A1-203ENST00000370096 OR9Q1Q8NGQ5 310 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 TBCKQ8TEA7 893 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 COA7Q96BR5 231 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 NDE1Q9NXR1 346 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 TRIM33Q9UPN9 1127 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
COL11A1-203ENST00000370096 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
COL11A1-203ENST00000370096 PTK2BQ14289 1009 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 DDIASQ8IXT1 998 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 MID2Q9UJV3 735 aa11.88□□□□□ -0.51
COL11A1-203ENST00000370096 CHUKO15111 745 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 HAUS5O94927 633 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 APOA1P02647 267 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ANXA13P27216 316 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ANO5Q75V66 913 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 SH3GL3Q99963 347 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 KLHL8Q9P2G9 620 aaPredicted RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 RWDD2AQ9UIY3 292 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 SATB2Q9UPW6 733 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 NPATQ14207 1427 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 KRT8P05787 483 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CUL1Q13616 776 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CUL3Q13618 768 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 UBE2SQ16763 222 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 DEPDC1Q5TB30 811 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CAPRIN2Q6IMN6 1127 aaKnown RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 DTX3LQ8TDB6 740 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 TSC22D4Q9Y3Q8 395 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CFAP69A5D8W1 941 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 TJP3O95049 919 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ABCB5Q2M3G0 1257 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 TRPM2O94759 1503 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 PRPF4O43172 522 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 SERPINB2P05120 415 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 CEP78Q5JTW2 689 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 PLEKHM3Q6ZWE6 761 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 NGRNQ9NPE2 291 aaKnown RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ANGPT1Q15389 498 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 ERICH1Q86X53 443 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 SYTL2Q9HCH5 934 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 A0A1W2PP64 1363 aa11.87□□□□□ -0.51
COL11A1-203ENST00000370096 KRT75O95678 551 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 GALNT17Q6IS24 598 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 ASZ1Q8WWH4 475 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 IP6K1Q92551 441 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 GAP43P17677 238 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 NR5A1Q13285 461 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 TERF2Q15554 542 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 PATL1Q86TB9 770 aaKnown RBP11.86□□□□□ -0.51
COL11A1-203ENST00000370096 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL11A1-203ENST00000370096 STOML1Q9UBI4 398 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 NCK2O43639 380 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 PMS2P54278 862 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 KRT17Q04695 432 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
COL11A1-203ENST00000370096 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
COL11A1-203ENST00000370096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL11A1-203ENST00000370096 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms