RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 OCA2Q04671 838 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 YWHAHQ04917 246 aaPredicted RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 KCNA1Q09470 495 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 GINS4Q9BRT9 223 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 DHX36Q9H2U1 1008 aaKnown RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 CFAP69A5D8W1 941 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 GSTA4O15217 222 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 GRIN3BO60391 1043 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 BAG2O95816 211 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 KRT10P13645 584 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 NNMTP40261 264 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 C16orf87Q6PH81 154 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 ZNF589Q86UQ0 364 aaPredicted RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 CNOT6LQ96LI5 555 aaKnown RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 JPH2Q9BR39 696 aaPredicted RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 PCDHA6Q9UN73 950 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 PCDHA8Q9Y5H6 950 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 CPP00450 1065 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 TROVE2P10155 538 aaKnown RBP eCLIP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 HADHAP40939 763 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 NDUFA8P51970 172 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 MARCH10Q8NA82 808 aaPredicted RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 ABTB1Q969K4 478 aaPredicted RBP7.59□□□□□ -1.19
SPTA1-201ENST00000368147 DCDC2Q9UHG0 476 aa7.59□□□□□ -1.19
SPTA1-201ENST00000368147 ASNSP08243 561 aa7.59□□□□□ -1.2
SPTA1-201ENST00000368147 ARL4AP40617 200 aa7.59□□□□□ -1.2
SPTA1-201ENST00000368147 CFAP221Q4G0U5 840 aa7.59□□□□□ -1.2
SPTA1-201ENST00000368147 FGD4Q96M96 766 aa7.59□□□□□ -1.2
SPTA1-201ENST00000368147 HYOU1Q9Y4L1 999 aa7.59□□□□□ -1.2
SPTA1-201ENST00000368147 PRPSAP2O60256 369 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 APOA1P02647 267 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ADD2P35612 726 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MAP3K10Q02779 954 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PPP2R5EQ16537 467 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 FAM71BQ8TC56 605 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 SH3GL3Q99963 347 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 CARD6Q9BX69 1037 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 USP44Q9H0E7 712 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 FEM1BQ9UK73 627 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 NUP160Q12769 1436 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 RIMS1Q86UR5 1692 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 RAB14P61106 215 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 HDDC2Q7Z4H3 204 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 TMEM260Q9NX78 707 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 FAM47DPA6NHR8 397 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MTRF1O75570 445 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 GPC3P51654 580 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 KIAA2013Q8IYS2 634 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ANKRD13CQ8N6S4 541 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 LARP4BQ92615 738 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 SIK2Q9H0K1 926 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 HPS4Q9NQG7 708 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PIH1D3Q9NQM4 214 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PIN4Q9Y237 131 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 HEG1Q9ULI3 1381 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ZNF263O14978 683 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 CXCR5P32302 372 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 STAT3P40763 770 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PEX19P40855 299 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 INAQ16352 499 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 TRIM68Q6AZZ1 485 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MLKLQ8NB16 471 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 SEPT5Q99719 369 aaPredicted RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PARVBQ9HBI1 364 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 BSDC1Q9NW68 430 aaPredicted RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ROBO2Q9HCK4 1378 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 WDR91A4D1P6 747 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PLEKHA8P1O95397 391 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 IGFBP4P22692 258 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ARL4DP49703 201 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PDE1BQ01064 536 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 C8orf34Q49A92 452 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 TRIML1Q8N9V2 468 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 QRICH2Q9H0J4 1663 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MRPS15P82914 257 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 DNAJC24Q6P3W2 148 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 ARMCX2Q7L311 632 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 DNAJC17Q9NVM6 304 aaKnown RBP7.58□□□□□ -1.2
SPTA1-201ENST00000368147 GGA3Q9NZ52 723 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MINPP1Q9UNW1 487 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 MRFAP1Q9Y605 127 aa7.58□□□□□ -1.2
SPTA1-201ENST00000368147 PYGMP11217 842 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 PRDX5P30044 214 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 ARL13BQ3SXY8 428 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 FAM133AQ8N9E0 248 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 FAM213AQ9BRX8 229 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.57□□□□□ -1.2
SPTA1-201ENST00000368147 TTC37Q6PGP7 1564 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 ZC3H4Q9UPT8 1303 aaKnown RBP7.57□□□□□ -1.2
SPTA1-201ENST00000368147 PNMA6FA0A0J9YX94 578 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 GNGT2O14610 69 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 MCF2LO15068 1137 aa7.57□□□□□ -1.2
SPTA1-201ENST00000368147 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms