RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NECAB2Q7Z6G3 386 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 DHX58Q96C10 678 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 CEP170P1Q96L14 293 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 SH2D3AQ9BRG2 576 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 PYM1Q9BRP8 204 aaKnown RBP17.01■□□□□ 0.31
TPM1-206ENST00000358278 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 ANKEF1Q9NU02 776 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 HDAC6Q9UBN7 1215 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 ALPK3Q96L96 1907 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 NRCAMQ92823 1304 aa17.01■□□□□ 0.31
TPM1-206ENST00000358278 COL1A2P08123 1366 aa17■□□□□ 0.31
TPM1-206ENST00000358278 ARHGEF35A5YM69 484 aa17■□□□□ 0.31
TPM1-206ENST00000358278 STBD1O95210 358 aa17■□□□□ 0.31
TPM1-206ENST00000358278 COL6A1P12109 1028 aa17■□□□□ 0.31
TPM1-206ENST00000358278 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
TPM1-206ENST00000358278 SYKP43405 635 aa17■□□□□ 0.31
TPM1-206ENST00000358278 NDUFA8P51970 172 aa17■□□□□ 0.31
TPM1-206ENST00000358278 NPEPPSP55786 919 aa17■□□□□ 0.31
TPM1-206ENST00000358278 GRIK4Q16099 956 aa17■□□□□ 0.31
TPM1-206ENST00000358278 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
TPM1-206ENST00000358278 IQUBQ8NA54 791 aa17■□□□□ 0.31
TPM1-206ENST00000358278 LMBR1Q8WVP7 490 aa17■□□□□ 0.31
TPM1-206ENST00000358278 LARP4BQ92615 738 aaKnown RBP17■□□□□ 0.31
TPM1-206ENST00000358278 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
TPM1-206ENST00000358278 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
TPM1-206ENST00000358278 CYP26B1Q9NR63 512 aa17■□□□□ 0.31
TPM1-206ENST00000358278 DBR1Q9UK59 544 aaKnown RBP17■□□□□ 0.31
TPM1-206ENST00000358278 GRIN2DO15399 1336 aa17■□□□□ 0.31
TPM1-206ENST00000358278 C17orf102A2RUQ5 167 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 EYA4O95677 639 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-206ENST00000358278 GNAT1P11488 350 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 RARRES1P49788 294 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 ATN1P54259 1190 aaPredicted RBP16.99■□□□□ 0.31
TPM1-206ENST00000358278 TRAPPC12Q8WVT3 735 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 RAD54LQ92698 747 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 SETD4Q9NVD3 440 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 GTF2IRD1Q9UHL9 959 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 HPSEQ9Y251 543 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 ARVCFO00192 962 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
TPM1-206ENST00000358278 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 SEZ6LQ9BYH1 1024 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 BLOC1S4Q9NUP1 217 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 TUBE1Q9UJT0 475 aa16.99■□□□□ 0.31
TPM1-206ENST00000358278 ZBTB42B2RXF5 422 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 PLA2G4BP0C869 781 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 POLGP54098 1239 aaPredicted RBP16.98■□□□□ 0.31
TPM1-206ENST00000358278 FAM160A1Q05DH4 1040 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 PTPN11Q06124 597 aaPredicted RBP16.98■□□□□ 0.31
TPM1-206ENST00000358278 NAALADL2Q58DX5 795 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 LRRC15Q8TF66 581 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 NOD1Q9Y239 953 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 MROH7Q68CQ1 1323 aa16.98■□□□□ 0.31
TPM1-206ENST00000358278 USO1O60763 962 aaKnown RBP16.97■□□□□ 0.31
TPM1-206ENST00000358278 MCM4P33991 863 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 MCM6Q14566 821 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
TPM1-206ENST00000358278 E2F4Q16254 413 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 GDF6Q6KF10 455 aaPredicted RBP16.97■□□□□ 0.31
TPM1-206ENST00000358278 SLC39A5Q6ZMH5 540 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 SLC43A3Q8NBI5 491 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 SLC7A3Q8WY07 619 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
TPM1-206ENST00000358278 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
TPM1-206ENST00000358278 RFC5P40937 340 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 PADI6Q6TGC4 694 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 EXOC8Q8IYI6 725 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 SYT2Q8N9I0 419 aaPredicted RBP16.96■□□□□ 0.31
TPM1-206ENST00000358278 RETREG2Q8NC44 543 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
TPM1-206ENST00000358278 MAGEB2O15479 319 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 TREHO43280 583 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 PQBP1O60828 265 aaKnown RBP16.96■□□□□ 0.3
TPM1-206ENST00000358278 DGAT1O75907 488 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 ZNF202O95125 648 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 LIG1P18858 919 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 KLRC1P26715 233 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 HOXC8P31273 242 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 SLC12A3P55017 1021 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 ZNF200P98182 395 aaPredicted RBP16.96■□□□□ 0.3
TPM1-206ENST00000358278 EMC2Q15006 297 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 PTGISQ16647 500 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 MTHFD1LQ6UB35 978 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 GPBP1Q86WP2 473 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 FMR1NBQ8N0W7 255 aaPredicted RBP16.96■□□□□ 0.3
TPM1-206ENST00000358278 METTL13Q8N6R0 699 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.3
TPM1-206ENST00000358278 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 ATP6V0A4Q9HBG4 840 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms