RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 WDR81Q562E7 1941 aa16.6■□□□□ 0.25
CCNE1-202ENST00000357943 RARRES1P49788 294 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 ATN1P54259 1190 aaPredicted RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 TARBP2Q15633 366 aaKnown RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 E2F4Q16254 413 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 CCDC73Q6ZRK6 1079 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 DHX58Q96C10 678 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 MYH9P35579 1960 aaKnown RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 NRCAMQ92823 1304 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 A0A0U1RQG5 324 aaPredicted RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 STAT6P42226 847 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 SYKP43405 635 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 GRIK4Q16099 956 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 UBE2Q1Q7Z7E8 422 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 SLC43A3Q8NBI5 491 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 LMBR1Q8WVP7 490 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 CEP89Q96ST8 783 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 ANKEF1Q9NU02 776 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 GTF2IRD1Q9UHL9 959 aa16.59■□□□□ 0.25
CCNE1-202ENST00000357943 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
CCNE1-202ENST00000357943 ARVCFO00192 962 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 EYA4O95677 639 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 LIG1P18858 919 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 HOXC8P31273 242 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 MCM4P33991 863 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 SNW1Q13573 536 aaKnown RBP16.58■□□□□ 0.24
CCNE1-202ENST00000357943 MCM6Q14566 821 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 MARCH8Q5T0T0 291 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
CCNE1-202ENST00000357943 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 KCTD17Q8N5Z5 321 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 LARP4BQ92615 738 aaKnown RBP16.58■□□□□ 0.24
CCNE1-202ENST00000357943 RAD54LQ92698 747 aa16.58■□□□□ 0.24
CCNE1-202ENST00000357943 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
CCNE1-202ENST00000357943 C17orf102A2RUQ5 167 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 NR1I2O75469 434 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 PLA2G4BP0C869 781 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 CDK7P50613 346 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 ADAM17P78536 824 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
CCNE1-202ENST00000357943 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 FMR1NBQ8N0W7 255 aaPredicted RBP16.57■□□□□ 0.24
CCNE1-202ENST00000357943 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
CCNE1-202ENST00000357943 ENGASEQ8NFI3 743 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 CCDC43Q96MW1 224 aaKnown RBP16.57■□□□□ 0.24
CCNE1-202ENST00000357943 STK17AQ9UEE5 414 aa16.57■□□□□ 0.24
CCNE1-202ENST00000357943 ARHGEF35A5YM69 484 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 TREHO43280 583 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 ZNF202O95125 648 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 SERTAD1Q9UHV2 236 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 COL1A2P08123 1366 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 C22orf31O95567 290 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 KLRC1P26715 233 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 PTPN11Q06124 597 aaPredicted RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 TBC1D8BQ0IIM8 1120 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 STAMQ92783 540 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 MTRQ99707 1265 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 PYM1Q9BRP8 204 aaKnown RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
CCNE1-202ENST00000357943 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
CCNE1-202ENST00000357943 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
CCNE1-202ENST00000357943 B4GALT4O60513 344 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 GNAT1P11488 350 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 POLGP54098 1239 aaPredicted RBP16.55■□□□□ 0.24
CCNE1-202ENST00000357943 SNX17Q15036 470 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 LRRC26Q2I0M4 334 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 RINT1Q6NUQ1 792 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 PADI6Q6TGC4 694 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 TRPV6Q9H1D0 765 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 CUEDC2Q9H467 287 aa16.55■□□□□ 0.24
CCNE1-202ENST00000357943 PQBP1O60828 265 aaKnown RBP16.54■□□□□ 0.24
CCNE1-202ENST00000357943 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
CCNE1-202ENST00000357943 DGAT1O75907 488 aa16.54■□□□□ 0.24
CCNE1-202ENST00000357943 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms