RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SPATA1Q5VX52 437 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 FOXP1Q9H334 677 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MAGED2Q9UNF1 606 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 USP42Q9H9J4 1324 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 POC1B-GALNT4F8VUJ3 575 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 STXBP2Q15833 593 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PTPROQ16827 1216 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TMED8Q6PL24 325 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TOGARAM2Q6ZUX3 1019 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 SEPT12Q8IYM1 358 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 STAG1Q8WVM7 1258 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 CEP19Q96LK0 163 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 NLRP4Q96MN2 994 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PGRMC1O00264 195 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 APOEP02649 317 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MARK3P27448 753 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 HNRNPH2P55795 449 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PSMD2Q13200 908 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 KYAT1Q16773 422 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PPP4R3CPQ6ZMV5 832 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 ADAT2Q7Z6V5 191 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 RAET1EQ8TD07 263 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 SPATA17Q96L03 361 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MMP19Q99542 508 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 SERPINI1Q99574 410 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 UBE2TQ9NPD8 197 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MAP3K20Q9NYL2 800 aaKnown RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PPP2R2CQ9Y2T4 447 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PLEKHG1Q9ULL1 1385 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 IQANK1A0A1B0GTG1 560 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PDE8BO95263 885 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 MT-ND3P03897 115 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 GNL1P36915 607 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-202ENST00000356435 TMEM179Q6ZVK1 233 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PBXIP1Q96AQ6 731 aa5.94□□□□□ -1.46
PTPRD-202ENST00000356435 PXDNLA1KZ92 1463 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 A0A0D9SFI3 127 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 KIF1CO43896 1103 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SUN1O94901 812 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 MAGEA9P43362 315 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 EHHADHQ08426 723 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 LBRQ14739 615 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SLC10A5Q5PT55 438 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ITPRIPL1Q6GPH6 555 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 NEXMIFQ5QGS0 1516 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 LRRC7Q96NW7 1537 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PYGBP11216 843 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SLC8A1P32418 973 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SLC16A2P36021 539 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 COPB1P53618 953 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 RASSF7Q02833 373 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PTGDRQ13258 359 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SNX1Q13596 522 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SLMAPQ14BN4 828 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TSGA10IPQ3SY00 556 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PATL1Q86TB9 770 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 RNF168Q8IYW5 571 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 P2RX5Q93086 422 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CCDC138Q96M89 665 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 GSDMAQ96QA5 445 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SH3GLB2Q9NR46 395 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SELENONQ9NZV5 590 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 RNF181Q9P0P0 153 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 KIAA1468Q9P260 1216 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PCDHB8Q9UN66 801 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PALLDQ8WX93 1383 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ASNSP08243 561 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 GTF2H3Q13889 308 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TRIM68Q6AZZ1 485 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SNRNP48Q6IEG0 339 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 MIGA2Q7L4E1 593 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CALR3Q96L12 384 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 EPAS1Q99814 870 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SENP1Q9P0U3 644 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 STRIP2Q9ULQ0 834 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 A0A087WUV0 522 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ERVV-1B6SEH8 477 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 RALAP11233 206 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PHKA1P46020 1223 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PDXDC1Q6P996 788 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 FOXP4Q8IVH2 680 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SCN4BQ8IWT1 228 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 FBXO18Q8NFZ0 1043 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ARHGEF1Q92888 912 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ASIC4Q96FT7 647 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TUBB6Q9BUF5 446 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CAPS2Q9BXY5 557 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PCIF1Q9H4Z3 704 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SP110Q9HB58 689 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 RCOR1Q9UKL0 485 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 STAP1Q9ULZ2 295 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ABCB11O95342 1321 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 E5RI56 91 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CALB1P05937 261 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 EIF2AK2P19525 551 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 KHDRBS2Q5VWX1 349 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PPP1R18Q6NYC8 613 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms