RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 PLCB1Q9NQ66 1216 aa14.53□□□□□ -0.08
NCDN-201ENST00000356090 ABCB11O95342 1321 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 CALUO43852 315 aaPredicted RBP14.52□□□□□ -0.08
NCDN-201ENST00000356090 TTLL1O95922 423 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 NR3C1P04150 777 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 TRIM49P0CI25 452 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 TRIM49CP0CI26 452 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 TNFAIP3P21580 790 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 TNFRSF8P28908 595 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.08
NCDN-201ENST00000356090 ZCWPW2Q504Y3 356 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 HIBCHQ6NVY1 386 aaPredicted RBP14.52□□□□□ -0.08
NCDN-201ENST00000356090 SYCP3Q8IZU3 236 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 MLXIPLQ9NP71 852 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 RGL1Q9NZL6 768 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 CTTNBP2NLQ9P2B4 639 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 CCNL1Q9UK58 526 aaPredicted RBP14.52□□□□□ -0.08
NCDN-201ENST00000356090 NR2E1Q9Y466 385 aa14.52□□□□□ -0.08
NCDN-201ENST00000356090 RPL13P26373 211 aaKnown RBP14.52□□□□□ -0.09
NCDN-201ENST00000356090 PSMD1Q99460 953 aa14.52□□□□□ -0.09
NCDN-201ENST00000356090 ANO3Q9BYT9 981 aa14.52□□□□□ -0.09
NCDN-201ENST00000356090 GANQ9H2C0 597 aa14.52□□□□□ -0.09
NCDN-201ENST00000356090 PKD2L1Q9P0L9 805 aa14.52□□□□□ -0.09
NCDN-201ENST00000356090 DAAM1Q9Y4D1 1078 aa14.52□□□□□ -0.09
NCDN-201ENST00000356090 PPP1R11O60927 126 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 DENND2CQ68D51 928 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 AADACL2Q6P093 401 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 RBM46Q8TBY0 533 aaKnown RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 SYN2Q92777 582 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 CXorf56Q9H5V9 222 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 DNAJC17Q9NVM6 304 aaKnown RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 AIPL1Q9NZN9 384 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 NARFQ9UHQ1 456 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 LEMD3Q9Y2U8 911 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 RGS16O15492 202 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 DR1Q01658 176 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 SNCBQ16143 134 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 NBPF9Q3BBW0 867 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 ZC2HC1CQ53FD0 456 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 ZNF746Q6NUN9 644 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 SLF2Q8IX21 1173 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 KIRREL3Q8IZU9 778 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 VCPKMTQ9H867 229 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 LRRC4CQ9HCJ2 640 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 USP40Q9NVE5 1235 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 SERPINB13Q9UIV8 391 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 ITGB4P16144 1822 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 PLCH1Q4KWH8 1693 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 PAPPAQ13219 1627 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 OPLAHO14841 1288 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 CHUKO15111 745 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 EVI5O60447 810 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 CAND2O75155 1236 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 GRAPQ13588 217 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 CTTNQ14247 550 aaKnown RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 PPP4R3AQ6IN85 833 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 CATSPER3Q86XQ3 398 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 SYCE1Q8N0S2 351 aa14.51□□□□□ -0.09
NCDN-201ENST00000356090 GRAPLQ8TC17 118 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 AJAP1Q9UKB5 411 aaPredicted RBP14.51□□□□□ -0.09
NCDN-201ENST00000356090 ESYT2A0FGR8 921 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 ZBTB5O15062 677 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 FSBPO95073 299 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 MMEP08473 750 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 NMT1P30419 496 aaKnown RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 PPP4CP60510 307 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 SPRED3Q2MJR0 410 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 SLC35G2Q8TBE7 412 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 N4BP2L2Q92802 583 aaPredicted RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 HVCN1Q96D96 273 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 ODF2LQ9ULJ1 636 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 BZW2Q9Y6E2 419 aaKnown RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 GBP2P32456 591 aaPredicted RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 BIRC3Q13489 604 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 LRRC14Q15048 493 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 FAM186BQ8IYM0 893 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 ANKS4BQ8N8V4 417 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 AZI2Q9H6S1 392 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 CCDC188H7C350 402 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 DDX3XO00571 662 aaKnown RBP eCLIP14.5□□□□□ -0.099e-7■■■□□ 15.3
NCDN-201ENST00000356090 EZRP15311 586 aaKnown RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 DRAP1Q14919 205 aaPredicted RBP14.5□□□□□ -0.09
NCDN-201ENST00000356090 SEPT2Q15019 361 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 DOK7Q18PE1 504 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 COBLL1Q53SF7 1204 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 SLC10A5Q5PT55 438 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 MREGQ8N565 214 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 DNAJC12Q9UKB3 198 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 PPP1R9AQ9ULJ8 1098 aa14.5□□□□□ -0.09
NCDN-201ENST00000356090 SHBGP04278 402 aa14.49□□□□□ -0.09
NCDN-201ENST00000356090 FGFR4P22455 802 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms