RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 DYDC2Q96IM9 177 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 INPP4AQ96PE3 977 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-201ENST00000354547 PDXKO00764 312 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-201ENST00000354547 CCT5P48643 541 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
COL13A1-201ENST00000354547 DDX42Q86XP3 938 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL13A1-201ENST00000354547 CSRNP1Q96S65 589 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 PKD2L1Q9P0L9 805 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 VAV3Q9UKW4 847 aa21.39■■□□□ 1.01
COL13A1-201ENST00000354547 RPS6KA5O75582 802 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 CYP2J2P51589 502 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 RINT1Q6NUQ1 792 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 SLC35C1Q96A29 364 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 RASSF4Q9H2L5 321 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 TYW1Q9NV66 732 aaKnown RBP21.38■■□□□ 1.01
COL13A1-201ENST00000354547 PRR12Q9ULL5 1215 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 PPFIA4O75335 1185 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 EPHA7Q15375 998 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 ARHGAP27Q6ZUM4 889 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 EPM2AIP1Q7L775 607 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-201ENST00000354547 USP38Q8NB14 1042 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 FAM20AQ96MK3 541 aa21.38■■□□□ 1.01
COL13A1-201ENST00000354547 RPL13P26373 211 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 PAK2Q13177 524 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 DPY19L2P1Q6NXN4 242 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 SEPT11Q9NVA2 429 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 TMEM51Q9NW97 253 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 TCP10L2B9ZVM9 353 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 ZEB2O60315 1214 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 ABCB4P21439 1286 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 PDCLQ13371 301 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 AOC3Q16853 763 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 DACT2Q5SW24 774 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 ZC3H3Q8IXZ2 948 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 QTRT2Q9H974 415 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 GDF3Q9NR23 364 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 GOLGA8KD6RF30 607 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 DDX39AO00148 427 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 KIF4AO95239 1232 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 FOSP01100 380 aaPredicted RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 NNTQ13423 1086 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 GLE1Q53GS7 698 aaKnown RBP21.37■■□□□ 1.01
COL13A1-201ENST00000354547 LRCH2Q5VUJ6 765 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 BCAS4Q8TDM0 211 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 WDR18Q9BV38 432 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 RNF14Q9UBS8 474 aa21.37■■□□□ 1.01
COL13A1-201ENST00000354547 CLRN2A0PK11 232 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 TGFB1I1O43294 461 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 PDE6BP35913 854 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 MOXD1Q6UVY6 613 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 MAATS1Q7Z4T9 603 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 PRMT6Q96LA8 375 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-201ENST00000354547 DDX47Q9H0S4 455 aaKnown RBP21.36■■□□□ 1.01
COL13A1-201ENST00000354547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL13A1-201ENST00000354547 TBX3O15119 743 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 FLOT1O75955 427 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 TRIM49P0CI25 452 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 TRIM49CP0CI26 452 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 KIAA1755Q5JYT7 1200 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 DAAM2Q86T65 1068 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 FAM186BQ8IYM0 893 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 CAVIN3Q969G5 261 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 SIX2Q9NPC8 291 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 PLCB1Q9NQ66 1216 aa21.36■■□□□ 1.01
COL13A1-201ENST00000354547 TRPC5Q9UL62 973 aaPredicted RBP21.36■■□□□ 1.01
COL13A1-201ENST00000354547 EYA4O95677 639 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 TNNC1P63316 161 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 ALS2CLQ60I27 953 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 PEX26Q7Z412 305 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 ADAT2Q7Z6V5 191 aaKnown RBP21.35■■□□□ 1.01
COL13A1-201ENST00000354547 IDI2Q9BXS1 227 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 SAMM50Q9Y512 469 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 NAA35Q5VZE5 725 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 GLYCTKQ8IVS8 523 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 SH3GL2Q99962 352 aa21.35■■□□□ 1.01
COL13A1-201ENST00000354547 ZNF233A6NK53 670 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 SLITRK3O94933 977 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 ARHGAP44Q17R89 818 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 STRIP1Q5VSL9 837 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 METTL13Q8N6R0 699 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 LTBP1Q14766 1721 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 DDX3XO00571 662 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL13A1-201ENST00000354547 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 ITGA4P13612 1032 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 CHRNA5P30532 468 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 GMCL1Q96IK5 515 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 OSGEPQ9NPF4 335 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 VPS36Q86VN1 386 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 TPCN2Q8NHX9 752 aa21.34■■□□□ 1.01
COL13A1-201ENST00000354547 METTL14Q9HCE5 456 aaKnown RBP21.34■■□□□ 1.01
COL13A1-201ENST00000354547 EVI5O60447 810 aa21.33■■□□□ 1.01
COL13A1-201ENST00000354547 ERVK-9P63128 1117 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms